Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_H07
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.71 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 51  SLNRSQHDAALPSTTPRQERKSST 122
           ++N+ Q   +   TTP++ERK++T
Sbjct: 776 NVNKEQSPNSTKETTPKKERKTAT 799


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 424 ALGRAAGGAKLPSAGLSLNASKAEASL 344
           ALGR AGG    S+ LSL+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 424 ALGRAAGGAKLPSAGLSLNASKAEASL 344
           ALGR AGG    S+ LSL+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 424 ALGRAAGGAKLPSAGLSLNASKAEASL 344
           ALGR AGG    S+ LSL+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 424 ALGRAAGGAKLPSAGLSLNASKAEASL 344
           ALGR AGG    S+ LSL+ +   +SL
Sbjct: 5   ALGRCAGGGGRLSSVLSLSLTSLASSL 31


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 6   FFFLSSSDES 35
           FFFLSS DES
Sbjct: 621 FFFLSSMDES 630


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 6   FFFLSSSDES 35
           FFFLSS DES
Sbjct: 621 FFFLSSMDES 630


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 398 RTTGRSAECMNQMSETAVPLVTE 466
           +  G+  +C N MSE  V ++ E
Sbjct: 170 KENGKEFDCHNYMSELTVDILLE 192


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 373 GLIPRMVASHHRPLGRVHEPNVRNCGSSRY*AVLLSQRQAISRVKLTCLT 522
           G I  ++AS HR L      NVR   +     VL+ + ++I   +  C+T
Sbjct: 219 GRISCVIASRHRNLEATESENVRPRRN-----VLIERAKSIRARRTECVT 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,294
Number of Sequences: 438
Number of extensions: 3553
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)