Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_G22
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       31   0.99 
08_01_1026 - 10366534-10368021,10368505-10368525                       29   3.0  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   3.0  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    23   4.9  
01_01_0083 + 631196-631675                                             25   5.3  
10_08_0827 + 20849312-20849833,20850352-20850417,20850786-208510...    29   5.3  
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212...    29   5.3  
05_02_0048 - 6066921-6067541                                           28   9.2  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +3

Query: 618 GGXXXXXPPPPPXXXXXXXXXXXXKXKKXPPPXXXGGGGGG 740
           GG      PPPP                 PPP   GGGGGG
Sbjct: 85  GGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGG 125


>08_01_1026 - 10366534-10368021,10368505-10368525
          Length = 502

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +3

Query: 639 PPPPPXXXXXXXXXXXXKXKKXPPPXXXGGGGGG 740
           PPPPP                  PP   GGGGGG
Sbjct: 88  PPPPPAEPEPEPEQDEEDAASMIPPASDGGGGGG 121


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +3

Query: 621 GXXXXXPPPPPXXXXXXXXXXXXKXKKXPPPXXXGGGGGG 740
           G     PPPPP                 PPP   G GGGG
Sbjct: 344 GAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGG 383


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 22.6 bits (46), Expect(3) = 4.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 412  PPPPPPXXG 438
            PPPPPP  G
Sbjct: 1109 PPPPPPPGG 1117



 Score = 21.8 bits (44), Expect(3) = 4.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 397  GXXXXPPPPPP 429
            G    PPPPPP
Sbjct: 1105 GAGAPPPPPPP 1115



 Score = 20.6 bits (41), Expect(3) = 4.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 415  PPPPPXXGGG 444
            PPPPP  G G
Sbjct: 1122 PPPPPIGGLG 1131


>01_01_0083 + 631196-631675
          Length = 159

 Score = 25.0 bits (52), Expect(2) = 5.3
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = -1

Query: 440 PPXXGGGGGGXXXXPXXXXFSQKXPPXKXXXXXPP 336
           PP  GGGGGG    P     +   P        PP
Sbjct: 93  PPAGGGGGGGGFNYPAPPPPNPIVPWYPWYYRSPP 127



 Score = 22.2 bits (45), Expect(2) = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 455 FFXXPPPXXGGGG 417
           ++  PPP  GGGG
Sbjct: 74  YWNYPPPQGGGGG 86


>10_08_0827 +
           20849312-20849833,20850352-20850417,20850786-20851082,
           20851215-20851412,20851748-20851849,20851960-20852100,
           20852171-20852278,20852588-20852670,20852829-20852991,
           20853636-20853650,20853968-20854093
          Length = 606

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 642 PPPPXXXXXXXXXXXXKXKKXPPPXXXGGGGGG 740
           PPPP            + +  PP    GGGGGG
Sbjct: 17  PPPPPLVSPRLRRGHVRLRLRPPRSSGGGGGGG 49


>09_04_0318 -
           16620177-16620582,16620686-16620765,16620873-16621213,
           16621298-16621559
          Length = 362

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +3

Query: 639 PPPPPXXXXXXXXXXXXKXKKXPPPXXXGGGGGG 740
           PPPPP                  PP   GGGGGG
Sbjct: 79  PPPPPSSESRHLEASTRGFDVNRPPSSGGGGGGG 112


>05_02_0048 - 6066921-6067541
          Length = 206

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 739 PPPPPPXXXGGGXF 698
           PPPPPP   GGG +
Sbjct: 112 PPPPPPPAAGGGGY 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,370,077
Number of Sequences: 37544
Number of extensions: 565958
Number of successful extensions: 7118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5886
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)