Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_G22
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    26   3.9  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    25   5.1  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    25   5.1  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (...    28   8.2  

>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 364 GGXFWEXXXXXGXXXXPPPPPPXXGGGXKKNF 459
           GG         G    PPPPPP  GGG ++ +
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGGRRRPY 227


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 25.8 bits (54), Expect(2) = 3.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 397 GXXXXPPPPPPXXGG 441
           G    PPPPPP  GG
Sbjct: 574 GAPPPPPPPPPMLGG 588



 Score = 21.4 bits (43), Expect(2) = 3.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 415 PPPPPXXGGG 444
           PPPPP   GG
Sbjct: 589 PPPPPPPPGG 598


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +1

Query: 337 GGFXXXXFXGGXFWEXXXXXGXXXXPPPPPPXXGGG 444
           GG       GG         G    PPPPPP  GGG
Sbjct: 29  GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGG 64



 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 397 GXXXXPPPPPPXXGGG 444
           G    PPPPPP  GGG
Sbjct: 106 GGGCAPPPPPPACGGG 121


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 25.0 bits (52), Expect(2) = 5.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 412 PPPPPPXXGG 441
           PPPPPP  GG
Sbjct: 809 PPPPPPPPGG 818



 Score = 21.8 bits (44), Expect(2) = 5.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 397 GXXXXPPPPPP 429
           G    PPPPPP
Sbjct: 806 GAPPPPPPPPP 816


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 25.0 bits (52), Expect(2) = 5.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 412 PPPPPPXXGG 441
           PPPPPP  GG
Sbjct: 809 PPPPPPPPGG 818



 Score = 21.8 bits (44), Expect(2) = 5.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 397 GXXXXPPPPPP 429
           G    PPPPPP
Sbjct: 806 GAPPPPPPPPP 816


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/43 (32%), Positives = 14/43 (32%)
 Frame = -2

Query: 739 PPPPPPXXXGGGXFXXFXXXXXXXXXKXXGGGGGXXXXXPPXG 611
           PPPP P   GGG                 GGGG      P  G
Sbjct: 33  PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACG 75


>AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (grd
           related) protein 5 protein.
          Length = 220

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 739 PPPPPPXXXGGGXF 698
           PPPPPP   GGG +
Sbjct: 34  PPPPPPSPCGGGGY 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,197
Number of Sequences: 27780
Number of extensions: 267493
Number of successful extensions: 2460
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)