Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_G19
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 113 6e-24
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 81 2e-14
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 50 6e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 44 0.004
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 42 0.016
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 36 0.78
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 35 1.8
UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 34 3.2
UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr prote... 34 4.2
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 34 4.2
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 34 4.2
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 33 7.3
UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 113 bits (271), Expect = 6e-24
Identities = 54/104 (51%), Positives = 69/104 (66%)
Frame = -3
Query: 583 ARKHXNPFKXFNPVFAG*PSEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEN 404
AR H + + F PWFVRNVDLHDDL LESI K+++S S R+FDKA RH+N
Sbjct: 833 ARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDN 892
Query: 403 PLIVAAGNYIPDPADRMESSXRRPKHVISDPPDPLTVLLGTSST 272
LIVAA +Y P+P S RRP+HV++DP DP+T+ L T S+
Sbjct: 893 RLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITLALDTFSS 936
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 81.4 bits (192), Expect = 2e-14
Identities = 34/76 (44%), Positives = 52/76 (68%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSXR 338
PW++R VDLH +L++ SI Y++S ++ +F+KAA H +PL+V+A NY P P R
Sbjct: 66 PWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANYQPVP--NAARPRR 123
Query: 337 RPKHVISDPPDPLTVL 290
RP+H+ DPPD +T +
Sbjct: 124 RPRHIFIDPPDEITAV 139
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = -2
Query: 200 PLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTK 66
P+ F SRFRS GRFCEA LLLG VLA S LSP P +
Sbjct: 74 PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNR 118
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -3
Query: 367 PADRMESSXRRPKHVISDPPDPLTVLLGTSSTGH 266
P D S R P HV+SDP D L+VLL SSTG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -2
Query: 248 SLATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRF 141
SL T G +++ R PLSFSPDLLSGSRFR+G +
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 514 WFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSXRR 335
WFVRN LH DL L ++ + S R+ D+ RH N L A P R+ + R+
Sbjct: 837 WFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQ 892
Query: 334 PKHVISDPP 308
P+ +I+ P
Sbjct: 893 PRDLITRSP 901
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 36.3 bits (80), Expect = 0.78
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = -3
Query: 583 ARKHXNPFKXFNPVFAG*PSEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEN 404
A+ H N + S PW++R D+ DL + + LQ+ + ++ ++ H N
Sbjct: 819 AKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPN 878
Query: 403 PLIVAAGNYIPDPAD-RMESSXRRPKHVISDPPD 305
L G AD R R +H D P+
Sbjct: 879 SLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YBR225W - Saccharomyces cerevisiae (Baker's yeast)
Length = 900
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 415 RHENPLIVAAGNYIPDPA---DRMESSXRRPKHVISDPPDPLTVLL 287
+H NP I N I DP +++ P+ VISDP D + +LL
Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402
>UniRef50_UPI0000F2DD3E Cluster: PREDICTED: similar to Ngfr protein;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
Ngfr protein - Monodelphis domestica
Length = 449
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +1
Query: 349 FPFCPQDRECSYRRPR*EGSRVV-------PLYRSGAWTPT 450
FP+C Q R C PR +GSR + P SGAW P+
Sbjct: 19 FPYCAQQRTCGLLEPRLQGSRCLENEPSSEPRRASGAWHPS 59
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 33.9 bits (74), Expect = 4.2
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSXRRP 332
F + D HD + + + + S+ H D LI A G IP A + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTDD--- 1764
Query: 331 KHVISDPPDPLTVLLGTS 278
HVI D PD LT LGT+
Sbjct: 1765 -HVIIDTPDALTAALGTA 1781
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 842 PYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 33.1 bits (72), Expect = 7.3
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = -3
Query: 526 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNY 377
S PWF+RN +L DL + ++ +++ + ++ NP + +Y
Sbjct: 428 SNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSLTYTIDY 477
>UniRef50_A0YVP1 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1857
Score = 33.1 bits (72), Expect = 7.3
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSXRRP 332
F+ ++DL D D++S S+ + N L++AA P DR
Sbjct: 1520 FLNSLDLKQDNDVDS-----SSSRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNLEV 1574
Query: 331 KHVISDPPDPLTVLLGT 281
+ V ++PP+P V+ GT
Sbjct: 1575 QQVATEPPNPGNVINGT 1591
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,295,374
Number of Sequences: 1657284
Number of extensions: 10097205
Number of successful extensions: 27065
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27060
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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