Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_G19
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 9e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 36 0.044
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 36 0.044
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 35 0.10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 35 0.10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 34 0.23
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro... 31 1.2
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom... 31 1.2
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P... 31 1.2
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 31 2.2
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 31 2.2
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 31 2.2
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 30 2.9
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 30 3.8
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 30 3.8
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 30 3.8
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 30 3.8
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 30 3.8
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 30 3.8
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 30 3.8
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 30 3.8
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 30 3.8
AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p pro... 29 6.6
AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-P... 29 6.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 41.9 bits (94), Expect = 9e-04
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 514 WFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSXRR 335
WFVRN LH DL L ++ + S R+ D+ RH N L A P R+ + R+
Sbjct: 837 WFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRPPRRL--NRRQ 892
Query: 334 PKHVISDPP 308
P+ +I+ P
Sbjct: 893 PRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 36.3 bits (80), Expect = 0.044
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 36.3 bits (80), Expect = 0.044
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
PW++RN ++H DL ++ + + + ++ +K H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 35.1 bits (77), Expect = 0.10
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = -3
Query: 583 ARKHXNPFKXFNPVFAG*PSEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEN 404
A+ H N + S PW++R D+ DL + + LQ+ + ++ ++ H N
Sbjct: 819 AKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPN 878
Query: 403 PLIVAAGNYIPDPAD-RMESSXRRPKHVISDPPD 305
L G AD R R +H D P+
Sbjct: 879 SLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 35.1 bits (77), Expect = 0.10
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = -3
Query: 583 ARKHXNPFKXFNPVFAG*PSEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHEN 404
A+ H N + S PW++R D+ DL + + LQ+ + ++ ++ H N
Sbjct: 621 AKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPN 680
Query: 403 PLIVAAGNYIPDPAD-RMESSXRRPKHVISDPPD 305
L G AD R R +H D P+
Sbjct: 681 SLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -3
Query: 517 PWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPL 398
P++VR LH DL+L ++ + + + R+ D+ RH + L
Sbjct: 842 PYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p
protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -3
Query: 526 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 347
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 346 SXRRPKH 326
+PKH
Sbjct: 308 VTVKPKH 314
>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA
topoisomerase III alpha protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -3
Query: 526 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 347
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 346 SXRRPKH 326
+PKH
Sbjct: 308 VTVKPKH 314
>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
protein.
Length = 1250
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -3
Query: 526 SEPPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMES 347
SEP W ++ + DDL +E A R FDK A EN L++ PDP +ES
Sbjct: 256 SEPFWKIKVLHTIDDLTVE-----FNWARNRLFDKEAC-ENYLLLCLAE--PDPRALVES 307
Query: 346 SXRRPKH 326
+PKH
Sbjct: 308 VTVKPKH 314
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 395
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 395
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 395
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 511 FVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 395
+ R D+ +++S + AS R+ + HENPLI
Sbjct: 455 YTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 478 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSXRRPKHVISDPPDP 302
DLE ISKYL SA + + + +++A G +P + + R + I D P+
Sbjct: 45 DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104
Query: 301 L 299
+
Sbjct: 105 M 105
>AY118395-1|AAM48424.1| 268|Drosophila melanogaster RE53819p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 323 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 171
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
>AE014296-1702|AAF50232.1| 268|Drosophila melanogaster CG18179-PA
protein.
Length = 268
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 323 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 171
H GS+ NGAFR R F S+P+ +G +R + F+ DL++
Sbjct: 95 HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,549,120
Number of Sequences: 53049
Number of extensions: 471663
Number of successful extensions: 1374
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -