Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_G07
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0059 - 394001-394708                                             31   1.0  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   3.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.2  

>08_01_0059 - 394001-394708
          Length = 235

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/51 (31%), Positives = 17/51 (33%)
 Frame = +2

Query: 605 PPGRXAXPPXXXSXXPXXXPXXSPLXPPXPXXXXWGLPXXSXXXSXXXPPP 757
           PP R A PP      P   P   P  PP P       P      +   PPP
Sbjct: 19  PPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPP 69


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/55 (32%), Positives = 19/55 (34%)
 Frame = +2

Query: 596  SXXPPGRXAXPPXXXSXXPXXXPXXSPLXPPXPXXXXWGLPXXSXXXSXXXPPPL 760
            S  PP +   PP      P   P  SP  PP P       P  S       PPPL
Sbjct: 1151 SDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPP----PLPSGPPPQPAPPPL 1201


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/51 (29%), Positives = 16/51 (31%)
 Frame = +2

Query: 605 PPGRXAXPPXXXSXXPXXXPXXSPLXPPXPXXXXWGLPXXSXXXSXXXPPP 757
           PP + A PP      P   P   P  PP P       P          PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,243,132
Number of Sequences: 37544
Number of extensions: 154753
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)