Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_G03
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0316 + 2361904-2362237,2362454-2363178                           30   1.8  
05_05_0333 + 24153090-24153593                                         30   2.4  
01_06_1440 + 37378121-37378958,37379344-37379494,37379567-373799...    30   2.4  
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744...    29   4.2  
05_03_0454 - 14227447-14228040                                         29   5.5  
05_01_0493 + 4113869-4116728,4116859-4117370                           29   5.5  
06_03_1027 + 27000498-27000503,27001325-27002271,27002359-27002698     28   7.3  
04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749     28   9.6  
03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830...    28   9.6  

>11_01_0316 + 2361904-2362237,2362454-2363178
          Length = 352

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 303 GPGAKGEGTGREVPARAHAEPREGRPCRQEKEETKRI 193
           G   KGE  G+  P      P +G+P  +EK E K+I
Sbjct: 35  GKPEKGETPGKGKPEERETPPGKGKPEEKEKPEKKKI 71


>05_05_0333 + 24153090-24153593
          Length = 167

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = -3

Query: 375 SAGEECKITGRLRDIAAVRRGLEPGPGAKGEGTGREVPARAHAEPREGRPCRQEKEETKR 196
           +A EE       R  A  R   E G GA+ E  G E+P     EP+  R C    E  +R
Sbjct: 5   AAEEEAVPVAEARAQAEKRAAAEDGEGAEAEEEGNEMP-----EPKRRRACVAALEGVRR 59

Query: 195 IA 190
            A
Sbjct: 60  AA 61


>01_06_1440 + 37378121-37378958,37379344-37379494,37379567-37379936,
            37380021-37380431,37380522-37380820,37380897-37381155,
            37381248-37381497,37381744-37381875,37381936-37382208,
            37383023-37383267
          Length = 1075

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 298  RSEGRRNRPRGTRSCARRATRGETMPPRK 212
            R++GRR+R   T+S  RRA RG   PP K
Sbjct: 987  RAQGRRDREHSTKSPLRRAARG---PPAK 1012


>07_01_0890 -
           7437901-7439339,7439452-7439657,7439841-7440171,
           7440268-7440405,7440619-7440874,7440963-7441318,
           7441421-7441709
          Length = 1004

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -3

Query: 432 CYFSTPPFDTVLYARRCGGSAGEECKITGRLRDIAAVRRGLEPGPGAKGEGTG 274
           C  S  P  TV+ A+ CGG  G E    G  ++ A      +   G  GEG G
Sbjct: 829 CGASKKPTATVVVAKCCGGGGGGEGTRCGASKNPATAAVVAKCCSGGGGEGIG 881


>05_03_0454 - 14227447-14228040
          Length = 197

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 389 AVAEAQQEKNARLRDAFGI 333
           A AEA++EK A +R+AFG+
Sbjct: 119 AAAEAEEEKEADMREAFGV 137


>05_01_0493 + 4113869-4116728,4116859-4117370
          Length = 1123

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = -3

Query: 342  LRDIAAVRRGLEPGPGAK----GEGTGREVPARAHAEPRE 235
            ++D+AA+ RG+    G +    G G G +   R  A+PR+
Sbjct: 1048 MKDVAALLRGIRHDDGVEARKAGNGVGTDAETRKRADPRQ 1087


>06_03_1027 + 27000498-27000503,27001325-27002271,27002359-27002698
          Length = 430

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 219 GGMVSPLVARRAHERVPLGLFLRPSLRV 302
           GG V   +ARR ++ VPLGL ++ +L V
Sbjct: 232 GGSVRQFLARRQNKSVPLGLAVKQALDV 259


>04_04_0037 + 22309681-22310532,22310638-22310977,22311613-22311749
          Length = 442

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 196 ALRFFFFLAAWSPLSWLGVRTSGYLSACSFALRSG 300
           A +F   LAA  P + + + TSG L+ CS +L +G
Sbjct: 259 ASQFSALLAATRPHAQVNIATSGELALCSLSLVTG 293


>03_05_0042 +
           20180151-20180468,20181595-20181665,20182929-20183087,
           20183598-20183664,20183913-20184008,20184687-20184733,
           20185113-20185193,20185704-20185806,20185967-20186028,
           20187188-20187302,20193191-20195087,20195206-20195492
          Length = 1100

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 270 EVPARAHAEPREGRPCRQEKEETKRIART 184
           E+P  + +   +G+PC+Q+KEE   ++ T
Sbjct: 692 ELPCVSASIEEQGKPCQQDKEEAHNLSVT 720


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,357,890
Number of Sequences: 37544
Number of extensions: 283928
Number of successful extensions: 1023
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)