Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_G03
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 56 1e-07
BC046104-1|AAH46104.1| 194|Homo sapiens SRRM2 protein protein. 56 1e-07
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 56 1e-07
BC020639-1|AAH20639.1| 196|Homo sapiens Unknown (protein for IM... 56 1e-07
BC007752-1|AAH07752.1| 195|Homo sapiens SRRM2 protein protein. 56 1e-07
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 56 1e-07
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 56 1e-07
AB016089-1|BAA83715.1| 253|Homo sapiens RNA binding protein pro... 56 1e-07
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 56 1e-07
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 56 1e-07
AF161338-1|AAF28898.1| 97|Homo sapiens HSPC075 protein. 55 3e-07
BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein. 33 0.88
BC038230-1|AAH38230.1| 279|Homo sapiens similar to metallo-beta... 31 4.7
AK096942-1|BAC04908.1| 199|Homo sapiens protein ( Homo sapiens ... 31 4.7
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>BC046104-1|AAH46104.1| 194|Homo sapiens SRRM2 protein protein.
Length = 194
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 25 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 69
>BC020639-1|AAH20639.1| 196|Homo sapiens Unknown (protein for
IMAGE:4733822) protein.
Length = 196
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>BC007752-1|AAH07752.1| 195|Homo sapiens SRRM2 protein protein.
Length = 195
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>AB016089-1|BAA83715.1| 253|Homo sapiens RNA binding protein
protein.
Length = 253
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 121 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 165
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 86 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 130
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RRA+E + P
Sbjct: 169 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAP 213
>AF161338-1|AAF28898.1| 97|Homo sapiens HSPC075 protein.
Length = 97
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -1
Query: 395 THAVAEAQQEKNARLRDAFGISPRFVEGSSLDPERRAKEQAERYP 261
TH +AE ++KN RLR AFGIS +V+GSS DP+RR +E + P
Sbjct: 34 THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRVREAKQPAP 78
>BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein.
Length = 210
Score = 33.5 bits (73), Expect = 0.88
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 396 YARRCGGSAGEECKITGRLRDIAAVRRGL--EPGPGAKGEGTGREVPARAHAEPREGRPC 223
+ RRCG AG+ + + + + RGL GPGA E T R PA P G PC
Sbjct: 35 WVRRCGCGAGQAGSMLRAVGSLLRLGRGLTVRCGPGAPLEATRRPAPAL----PPRGLPC 90
>BC038230-1|AAH38230.1| 279|Homo sapiens similar to
metallo-beta-lactamase superfamily protein protein.
Length = 279
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 329 PRFVEGSSLDPERRAKEQAERYPLVRTPSHERGDH 225
P ++ S L +R AKE A R PL+ +H DH
Sbjct: 54 PEYLYSSGLLQDREAKEDAARRPLLAVATHVHFDH 88
>AK096942-1|BAC04908.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39623 fis, clone SMINT2001348. ).
Length = 199
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 329 PRFVEGSSLDPERRAKEQAERYPLVRTPSHERGDH 225
P ++ S L +R AKE A R PL+ +H DH
Sbjct: 54 PEYLYSSGLLQDREAKEDAARRPLLAVATHVHFDH 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,270,765
Number of Sequences: 237096
Number of extensions: 1460832
Number of successful extensions: 4119
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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