Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_F22
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 0.51
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.2
05_01_0141 - 937428-937717,938483-938705 30 2.1
09_02_0495 + 9880714-9881196 29 2.8
07_01_0080 + 587674-588510 29 3.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.9
01_06_0046 + 25943183-25943590 29 4.9
01_05_0423 + 22032940-22033695 29 4.9
01_03_0005 + 11568545-11569119,11569179-11569191 29 4.9
11_01_0359 - 2731522-2732346 28 8.6
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 8.6
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPP 382
PPPP G F PPPPP
Sbjct: 550 PPPPPSGNKPAFSPPPPPPP 569
Score = 29.1 bits (62), Expect(2) = 0.51
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPP 382
PPPP G F PPPPP
Sbjct: 651 PPPPAPGIGNKFPAPPPPPP 670
Score = 21.4 bits (43), Expect(2) = 0.51
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -3
Query: 396 PPPPPXXXXXGXXXPPGGXXFVPP 325
PPPPP PG PP
Sbjct: 691 PPPPPPLPPANRTNGPGVPSAPPP 714
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 346 PPPPAKGPP------PPPPPKGPSPPPPPPPGGKKGGPP 378
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP PPPPP PP G PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 486 GGGXXKKXXXFXXFFPPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGG 343
GGG ++PPPP PPPPP G PP G
Sbjct: 25 GGGHGYPYPPQQGYYPPPPTA--------YPPPPPAGYGGGYGYPPAG 64
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = -1
Query: 584 GGXXXXP--PPPXXGGGXFXXXKKXXXXXXXXXXGGGGXXKKXXXFXXFFPPPPXGXXXX 411
GG P PPP GG GGG F +PPPP G
Sbjct: 30 GGSCPYPCLPPPIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPGVMPG 89
Query: 410 XF 405
F
Sbjct: 90 AF 91
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 435 PPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PP G F PPPPP G PP PP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPP 115
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PP PP
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>01_06_0046 + 25943183-25943590
Length = 135
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPP 349
PPPP +++ PPPP PP
Sbjct: 50 PPPPALPPPPPYYYYSPPPPAYYPGSYCPPP 80
>01_05_0423 + 22032940-22033695
Length = 251
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPP 385
PPPP G F PPPP
Sbjct: 168 PPPPPQGQQQLLFLPPPPP 186
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 424 PXGGGGKKXXKXXXFFXXPPPPXXXXXXXKXFFXXXKXXPPPXXGGGG 567
P GGGG + PPPP PPP GGGG
Sbjct: 76 PSGGGGGGGG-GTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGG 122
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Frame = -1
Query: 587 GGGXXXX--PPPPXXGGG---XFXXXKKXXXXXXXXXXGGGGXXKKXXXFXXFFP-PPPX 426
GGG PPPP GGG GGGG ++ +P PPP
Sbjct: 84 GGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPP 143
Query: 425 GXXXXXF---FFXPPPP 384
F ++ PPPP
Sbjct: 144 NPFLPYFPFYYYSPPPP 160
>11_01_0359 - 2731522-2732346
Length = 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPP 349
PPPP + PPPPP PP
Sbjct: 52 PPPPPPHAYHHHHYPPPPPPHHHPYPPHPPP 82
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 471 KKXXXFXXFFPPPPXXGXXXXFFFXPPPPP 382
KK PPPP ++ PPPPP
Sbjct: 101 KKKKRHHHHHPPPPPPPHLLHYYGHPPPPP 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,570,770
Number of Sequences: 37544
Number of extensions: 551825
Number of successful extensions: 1368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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