Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_F22
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 1.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 1.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVP 328
PPPP G PPPPP G PP F P
Sbjct: 761 PPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPP--------PPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPP---XXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P G PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVP 328
PPPP G PPPPP G PP F P
Sbjct: 761 PPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 743 PPPPPPGGLPPISGGPPPPP--------PPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPP---XXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P G PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVP 328
PPPP G PPPPP G PP F P
Sbjct: 344 PPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 326 PPPPPPGGLPPISGGPPPPP--------PPPGGCPPPPP 356
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPP---XXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP PPGG PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P G PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPP 345
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P +PP
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P +PP
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 447 FFPPPPXXGXXXXFFFXPPPPPXXXXXGXXXP 352
F PPPP G F PPP P G P
Sbjct: 320 FMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 447 FFPPPPXXGXXXXFFFXPPPPPXXXXXGXXXP 352
F PPPP G F PPP P G P
Sbjct: 320 FMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPP G PP PP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPP G PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPP G PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P PP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPP 349
PPP G PPPPP G PP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G PPG PP
Sbjct: 288 PPPPSSGMWPP----PPPPPPGRTPG---PPGMPGMPPP 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G P PP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPP 349
PPP G PPPPP G PP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 441 PPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPPP G PPPPP G PPG PP
Sbjct: 298 PPPPSSGMWPP----PPPPPPGRTPG---PPGMPGMPPP 329
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 447 FFPPPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
F PPPP G PPPP G PP +PP
Sbjct: 73 FIPPPPGPGGI-------PPPPPMFAGGIPPPPPMMGGIPP 106
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -3
Query: 438 PPPXXGXXXXFFFXPPPPPXXXXXGXXXPPGGXXFVPP 325
PPP G F PPPPP PP + P
Sbjct: 35 PPPACGNPCGGGFGPPPPPFGPVGYALPPPPPNGYALP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,943,181
Number of Sequences: 27780
Number of extensions: 299205
Number of successful extensions: 713
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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