Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_F09
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.10
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.18
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 32 0.54
08_01_0059 - 394001-394708 31 0.94
07_03_1136 + 24218601-24218734,24218769-24219906 30 1.6
05_01_0142 - 940421-940701,941262-941574 30 1.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 3.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.0
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 28 6.6
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 28 6.6
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 28 8.8
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 8.8
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 438 GGPPXXGGXXPPXGXXX-PPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGG 593
G PP PP G PPPP GG PP P PPP GG
Sbjct: 1107 GAPPPP---PPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGG 1156
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/60 (38%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Frame = +3
Query: 435 GGGPPXX--GGXXPPXGXXXPPPPRR----GGEXXXXXXXXPPXPXXXXXXXXPPPXGGG 596
GG PP GG PP PPPPR GG PP P PPP G G
Sbjct: 1171 GGTPPPNAHGGVAPP-----PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 468 PPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGGG 596
PP PPPP +G PP P PPP GG
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 444 PPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGGG 596
PP G PP PPPP G PP P PPP GG
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPP----PPPPGGKKGGPPPPPPKGG 385
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 444 PPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGG 593
PP PP PPPP +G PP P PPP GG
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKG--------PPPPPPPKGPSPPPPPPPGG 372
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 483 PXPGGXXPPPXXGGPPPXXXXXKIFXXXPPXXGG 382
P P G PPP GPPP PP GG
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 444 PPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXG 590
PP P PPPP + PP P PPP G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 441 GPPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGG 593
GPP PP G PPPP GG+ PP P PP G
Sbjct: 352 GPPPP---PPPKGPSPPPPPPPGGK-----KGGPPPPPPKGGASRPPAAPG 394
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 504 GAXGGGXPXPGGXXPPPXXGGPPPXXXXXKIFXXXPPXXGG 382
G GGG GG PP G PPP +F P G
Sbjct: 327 GYQGGGPGYHGGNPPPYQAGNPPPYQAGNPVFAGGAPGYQG 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 435 GGGPPXXGGXXPPXGXXXPPPPRRG 509
GGGP GG PP PPP + G
Sbjct: 330 GGGPGYHGGNPPPYQAGNPPPYQAG 354
>08_01_0059 - 394001-394708
Length = 235
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 444 PPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPP 581
PP PP PPPPRR PP P PP
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 444 PPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPP 584
PP P PPPP R PP P PPP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 438 GGPPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGGG 596
G PP GG P G PP GG PP P P GGG
Sbjct: 89 GLPPGGGGAPGPLGGGGARPP--GGGGGGGPPSLPPGAGGGGGARPPAPGGGG 139
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 438 GGPPXXGGXXPPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXG 590
G PP G PP G PPP G PP PPP G
Sbjct: 39 GYPPPPGAYPPPPGAYPPPP----GAYPPPPGAYPPQHGYPQPGGYPPPGG 85
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 434 GGGPPXXGGGXXPPGXGXPPPXAPXXXXXXXXXXXXPXPXXXXXXXXPPPXG 589
G PP G PPG PPP A P P PP G
Sbjct: 45 GAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYPPAG 96
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 434 GGGPPXXGGGXXPPGXGXPPPXAPXXXXXXXXXXXXPXPXXXXXXXXPPPXGG 592
GGGP G PP G PPP P P P P GG
Sbjct: 344 GGGP-----GSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGG 391
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 1/73 (1%)
Frame = +2
Query: 368 FXXKPPPXXGGXXXKIFXXXXXGGGPPXXGGGXXPPG-XGXPPPXAPXXXXXXXXXXXXP 544
F PPP G G GPP PP PPP P P
Sbjct: 51 FLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPP 110
Query: 545 XPXXXXXXXXPPP 583
P PPP
Sbjct: 111 PPPPSPPPSAPPP 123
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +3
Query: 435 GGGPPXXGGXXPPXGXXX---PPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPP 584
G GPP PP PPPP G PP P PPP
Sbjct: 73 GPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 489 GXPXPGGXXPPPXXGGPPPXXXXXKIFXXXPP 394
G P P PPP GPPP F PP
Sbjct: 46 GAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPP 77
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 433 GGGAPXXGGGXXPPXGGXXPP 495
GG AP GG PP G PP
Sbjct: 1168 GGEAPEPNGGPRPPTAGAGPP 1188
>01_06_1164 - 35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 433 GGGAPXXGGGXXPPXGGXXPP 495
GG AP GG PP G PP
Sbjct: 1160 GGEAPEPNGGPRPPTAGAGPP 1180
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 482 PPXGGXXPPPXXGAPPP 432
PP GG PPP PPP
Sbjct: 423 PPYGGYMPPPRMPYPPP 439
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = +3
Query: 438 GGPPXXGGXX-PPXGXXXPPPPRRGGEXXXXXXXXPPXPXXXXXXXXPPPXGGG 596
GGPP PP PPPP PP PPP G
Sbjct: 262 GGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANG 315
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 482 PPXGGXXPPPXXGAPPPXXXXXKFFXXXPPXXGG 381
PP GG PPP PPP PP GG
Sbjct: 298 PPVGGTQPPP---PPPPLANGPPRSIPPPPMTGG 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,958,118
Number of Sequences: 37544
Number of extensions: 475740
Number of successful extensions: 2013
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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