Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_F08
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 0.67
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 0.67
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 0.69
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.72
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.3
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 2.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 2.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 2.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 2.2
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 24 2.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.8
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 5.1
U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 28 5.1
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 28 5.1
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 6.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 6.7
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 28 6.7
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 28 6.7
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 28 6.7
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 24 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP GG PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 26.6 bits (56), Expect(2) = 0.67
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 578 PPPPPPPP 555
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 579 PPPPPPP 559
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 576 PPPPPPP 556
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.0 bits (47), Expect(2) = 0.67
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 572 PPPPPPXKXXXXXGG 528
PPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP GG PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 26.6 bits (56), Expect(2) = 0.67
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 578 PPPPPPPP 555
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 579 PPPPPPP 559
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 576 PPPPPPP 556
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 23.0 bits (47), Expect(2) = 0.67
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 572 PPPPPPXKXXXXXGG 528
PPPPPP GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP GG PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 26.6 bits (56), Expect(2) = 0.69
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 578 PPPPPPPP 555
PPPPPPPP
Sbjct: 341 PPPPPPPP 348
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 579 PPPPPPP 559
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 576 PPPPPPP 556
PPPPPPP
Sbjct: 367 PPPPPPP 373
Score = 23.0 bits (47), Expect(2) = 0.69
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 572 PPPPPPXKXXXXXGG 528
PPPPPP GG
Sbjct: 352 PPPPPPPPPGGFKGG 366
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP GGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGG 322
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGG 321
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP GGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGG 322
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGG 321
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 575 PPPPPPPXK 549
PPPPPPP K
Sbjct: 26 PPPPPPPPK 34
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 578 PPPPPPPP 555
P PPPPPP
Sbjct: 24 PQPPPPPP 31
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 358 GXXPPPPPXXXGGXXPPXXXFXXXXXXXPPXG 453
G PPPPP GG PP F PP G
Sbjct: 92 GGIPPPPPM-MGGIPPPPPMFGAPPPPPPPSG 122
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 325 PXGGXKXXXXKGXXPPPPPXXXGGXXPP 408
P G G PPPPP GG PP
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPP 97
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 488 GGXKKXXXXXXXPPPPXXXXXXXGGGGGGGG 580
GG PPP GGGGGGGG
Sbjct: 31 GGGASKVGGGAAPPPGTSVYMGAGGGGGGGG 61
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 484 GGGXKKXXXXXFXXPPPXXXXXFXGGGGGGGG 579
GGG PPP GGGGGGG
Sbjct: 29 GGGGGASKVGGGAAPPPGTSVYMGAGGGGGGG 60
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 323 PPXGGXKXXXXRGXXPPPPLXXXGGXXP 406
PP GG G PPPPL G P
Sbjct: 220 PPIGGIAPVNAHGAPPPPPLPPVGAGAP 247
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 323 PPXGGXKXXXXRGXXPPPPLXXXGGXXP 406
PP GG G PPPPL G P
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAP 233
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 323 PPXGGXKXXXXRGXXPPPPLXXXGGXXP 406
PP GG G PPPPL G P
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAP 233
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 576 PPPPPPPXK 550
PPPPPPP +
Sbjct: 1726 PPPPPPPVR 1734
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 575 PPPPPPPXK 549
PPPPPPP +
Sbjct: 1726 PPPPPPPVR 1734
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 579 PPPPPPPP 556
P PPPPPP
Sbjct: 1724 PTPPPPPP 1731
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 578 PPPPPPPP 555
P PPPPPP
Sbjct: 1724 PTPPPPPP 1731
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGG 526
PPPPPPPP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAG 647
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 578 PPPPPPPPXKXXXXXGGG 525
PPPPPPPP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAG 647
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGG 526
PPPPPPPP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAG 473
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 578 PPPPPPPPXKXXXXXGGG 525
PPPPPPPP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAG 473
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 323 PPXGGXKXXXXRGXXPPPPLXXXG-GXXPXXXXFXPXXXXXPPXGXKXXXXFXXXXGGXK 499
PP G RG PPPP G G P P PP G GG
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG-- 347
Query: 500 KXXXXXXXPPPP 535
PPPP
Sbjct: 348 -PYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +2
Query: 323 PPXGGXKXXXXRGXXPPPPLXXXG-GXXPXXXXFXPXXXXXPPXGXKXXXXFXXXXGGXK 499
PP G RG PPPP G G P P PP G GG
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG-- 347
Query: 500 KXXXXXXXPPPP 535
PPPP
Sbjct: 348 -PYPPFFPPPPP 358
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP G G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP G G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 575 PPPPPPPXKXXXXXGGGXXXXXXXXFXXPPP 483
PPPPPPP G G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 579 PPPPPPPPXK 550
PPPPPPPP K
Sbjct: 251 PPPPPPPPPK 260
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 578 PPPPPPPPXK 549
PPPPPPPP K
Sbjct: 251 PPPPPPPPPK 260
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 579 PPPPPPPPXK 550
PPPPPPPP K
Sbjct: 266 PPPPPPPPPK 275
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 578 PPPPPPPPXK 549
PPPPPPPP K
Sbjct: 266 PPPPPPPPPK 275
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = -3
Query: 579 PPPPPPPPXK---XXXXXGGGGXK 517
PPPPPPPP GGGG +
Sbjct: 534 PPPPPPPPRSSGANGNRNGGGGNR 557
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 524 PPPPXXXXXXXGGGGGGGG 580
PPP GGGGGGGG
Sbjct: 723 PPPVAPAVAFAGGGGGGGG 741
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 524 PPPPXXXXXXXGGGGGGGG 580
PPPP GGGGGG G
Sbjct: 55 PPPPPACGGGCGGGGGGCG 73
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 524 PPPPXXXXXXXGGGGGGGG 580
PPPP GGGGG GG
Sbjct: 56 PPPPACGGGCGGGGGGCGG 74
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 524 PPPPXXXXXXXGGGGGGGG 580
PPPP GGGGGG G
Sbjct: 112 PPPPPACGGGCGGGGGGCG 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 524 PPPPXXXXXXXGGGGGGGG 580
PPPP GGGGG GG
Sbjct: 113 PPPPACGGGCGGGGGGCGG 131
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 574 PPPPPPXXXXXXXGGGG 524
PPPPPP GGGG
Sbjct: 54 PPPPPPACGGGCGGGGG 70
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 574 PPPPPPXXXXXXXGGGG 524
PPPPPP GGGG
Sbjct: 111 PPPPPPACGGGCGGGGG 127
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 577 PPPPPPPXXXXXXXGGGG 524
PPPPPP GGGG
Sbjct: 54 PPPPPPACGGGCGGGGGG 71
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 577 PPPPPPPXXXXXXXGGGG 524
PPPPPP GGGG
Sbjct: 111 PPPPPPACGGGCGGGGGG 128
>U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical
protein T15B12.2 protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 579 PPPPPPPPXK 550
PPPPPPPP K
Sbjct: 402 PPPPPPPPQK 411
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 578 PPPPPPPPXK 549
PPPPPPPP K
Sbjct: 402 PPPPPPPPQK 411
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 579 PPPPPPPPXK 550
PPPPPPPP K
Sbjct: 251 PPPPPPPPPK 260
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 578 PPPPPPPPXK 549
PPPPPPPP K
Sbjct: 251 PPPPPPPPPK 260
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 579 PPPPPPPPXK 550
PPPPPPPP K
Sbjct: 266 PPPPPPPPPK 275
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 578 PPPPPPPPXK 549
PPPPPPPP K
Sbjct: 266 PPPPPPPPPK 275
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP G G
Sbjct: 361 PPPPPPPPPPSAASNGRSG 379
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP + G G
Sbjct: 297 PPPPPPPPGRTPGPPGMPG 315
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 579 PPPPPPPPXKXXXXXGGGG 523
PPPPPPPP + G G
Sbjct: 307 PPPPPPPPGRTPGPPGMPG 325
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 123 FRGAPRGXFFLPNXGKGGFXPXKGXXGFXP 212
F P+G F PN +GGF P +G GF P
Sbjct: 88 FNNNPQGGFH-PNPNQGGFHPNQG--GFHP 114
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 123 FRGAPRGXFFLPNXGKGGFXPXKGXXGFXP 212
F P+G F PN +GGF P +G GF P
Sbjct: 88 FNNNPQGGFH-PNPNQGGFHPNQG--GFHP 114
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 123 FRGAPRGXFFLPNXGKGGFXPXKGXXGFXP 212
F P+G F PN +GGF P +G GF P
Sbjct: 88 FNNNPQGGFH-PNPNQGGFHPNQG--GFHP 114
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 578 PPPPPPP 558
PPPPPPP
Sbjct: 134 PPPPPPP 140
Score = 21.8 bits (44), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 575 PPPPPPPXK 549
PPPPPP K
Sbjct: 180 PPPPPPHRK 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,189,358
Number of Sequences: 27780
Number of extensions: 265270
Number of successful extensions: 7607
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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