Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_F03
         (833 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    33   0.64 
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    33   0.64 
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    31   2.6  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPP 675
           PPP  G   PP      +   P     + PPPPP     PP
Sbjct: 459 PPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPP 499



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/46 (30%), Positives = 16/46 (34%)
 Frame = +1

Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGG 690
           PPP      PP      +   P     + PPPPP     PP    G
Sbjct: 449 PPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSG 494


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPP 675
           PPP  G   PP      +   P     + PPPPP     PP
Sbjct: 459 PPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPP 499



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/46 (30%), Positives = 16/46 (34%)
 Frame = +1

Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGG 690
           PPP      PP      +   P     + PPPPP     PP    G
Sbjct: 449 PPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSG 494


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = +1

Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
           PPP      PP KK+ + +  P     F PP  P     PP      PP
Sbjct: 260 PPPTPTYIPPPPKKQGYDYPKPA--IPFPPPTAPPQKYLPPVTTTQAPP 306


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,339,123
Number of Sequences: 53049
Number of extensions: 469129
Number of successful extensions: 2006
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)