Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_F03
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.11
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.11
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.58
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.58
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.58
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.1
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 9.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP G PP P G PPPPP PP G PP
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGM-PPPPPPSRFGPPGMGGMPPP 336
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP G P P +PPPPP PP G PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP G PP P G PPPPP PP G PP
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGM-PPPPPPSRFGPPGMGGMPPP 346
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP G P P +PPPPP PP G PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP PP + P G PPPPP PP G PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 556 PPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PP G PP P PPPPP PP G PP
Sbjct: 247 PPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 640 PPPPPXXXXXPPXXXGGXPP 699
PPPPP PP G PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPP 256
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP PP + P G PPPPP PP G PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP 320
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 556 PPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PP G PP P PPPPP PP G PP
Sbjct: 268 PPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 640 PPPPPXXXXXPPXXXGGXPP 699
PPPPP PP G PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPP 277
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PPP PP + P G PPPPP PP G PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPPRAGSPPP 305
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 556 PPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXPP 699
PP G PP P PPPPP PP G PP
Sbjct: 253 PPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 640 PPPPPXXXXXPPXXXGGXPP 699
PPPPP PP G PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPP 262
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 640 PPPPPXXXXXPPXXXGGXPP 699
PPPPP PP GG PP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPP 791
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 640 PPPPPXXXXXPPXXXGGXPP 699
PPPPP PP GG PP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPP 791
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 634 FFPPPPPXXXXXPPXXXGGXPP 699
F PPP P PP GG PP
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPP 85
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +1
Query: 580 PPXKK--KXFFFXXPGGXXXFFPPP--PPXXXXXPPXXXGGXPP 699
PP + K FF P F PPP P PP GG PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPP 96
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPP 675
PPP G PP P PPPPP PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFF--PPPPPXXXXXPPXXXGGXPP 699
PPP G PP PGG PPPPP PP G PP
Sbjct: 713 PPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFF--PPPPPXXXXXPPXXXGGXPP 699
PPP G PP PGG PPPPP PP G PP
Sbjct: 713 PPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFF--PPPPPXXXXXPPXXXGGXPP 699
PPP G PP PGG PPPPP PP G PP
Sbjct: 296 PPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +1
Query: 538 FXXXXPPPXXGXXXPPXKKKXFFFXXPGGXXXFF---PPPPPXXXXXPPXXXGGXPP 699
F PP G PP K P G F+ PP P PP GG P
Sbjct: 198 FCFDCPPARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGP 254
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPG-GXXXFFPPPPPXXXXXPPXXXGGXP 696
PPP G PP G G PPPPP PP G P
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEP 82
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPGGXXXFFPPPPPXXXXXPPXXXGGXP 696
PP G PP + G PPPPP PP G P
Sbjct: 67 PPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEP 114
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPG-GXXXFFPPPPPXXXXXPPXXXGGXP 696
PPP G PP G G PPPPP PP G P
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 145
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 553 PPPXXGXXXPPXKKKXFFFXXPG-GXXXFFPPPPPXXXXXPPXXXGGXP 696
PPP G PP G G PPPPP PP G P
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 176
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +1
Query: 619 GGXXXFFPPPPPXXXXXP-PXXXGGXPP 699
GG PPPPP P P GG PP
Sbjct: 27 GGCGCGAPPPPPACAPPPAPACGGGAPP 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,547,919
Number of Sequences: 27780
Number of extensions: 194777
Number of successful extensions: 1023
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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