Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_E07
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 107 1e-23
01_05_0816 + 25462571-25462630,25462752-25462838,25462929-254629... 62 4e-10
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 59 3e-09
01_05_0818 + 25468257-25468271,25468504-25468575,25469647-254697... 53 2e-07
07_03_1093 + 23912303-23912467,23912671-23912801,23913079-239130... 42 5e-04
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 40 0.003
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 38 0.008
11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466,377... 37 0.018
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 35 0.054
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 35 0.054
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 33 0.22
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 32 0.50
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 31 1.2
05_01_0579 - 5196888-5196970,5197063-5197621,5197704-5197786,519... 29 2.7
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668... 29 3.5
06_02_0208 - 13026296-13026654,13027394-13027497,13028109-130282... 29 3.5
10_01_0136 - 1639780-1639901,1640038-1640093,1641958-1642061,164... 29 4.7
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 29 4.7
02_05_1127 + 34292894-34293284,34293948-34295443 29 4.7
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 28 6.2
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 28 8.2
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 107 bits (256), Expect = 1e-23
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Frame = -3
Query: 669 FKXXXXXXKHXXRXVSXXXDMKSXXXTGFXXGQXGGPXG-HPVXEPDQPPRTTSRSSATG 493
FK K+ R ++ D + GF G G G H + + Q T + G
Sbjct: 183 FKRIQSPLKYQTRCLAAFPDQQ-----GFLVGSIEGRVGVHHIDDSQQSKNFTFKCHREG 237
Query: 492 PRARWAAXQDXYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCA 313
D ++VN + FHPVH T AT GSDG+F+FWDKD++ +LK+ +
Sbjct: 238 --------NDIFSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCST 289
Query: 312 FNHSGQIFAYAVGYDWSKGHEHYNP-NKKTFIYLRASYE-ELKARP 181
FN G IFAYAV YDWS+G E++NP KT IYL + E E+K +P
Sbjct: 290 FNSDGSIFAYAVCYDWSRGAENHNPATAKTSIYLHSPQESEVKGKP 335
>01_05_0816 +
25462571-25462630,25462752-25462838,25462929-25462961,
25462962-25463030,25463146-25463339,25463632-25463773,
25464126-25464165,25464428-25464594,25465114-25465116,
25465371-25465499,25465811-25465888,25465974-25465979
Length = 335
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -3
Query: 465 DXYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKS 349
D YAVN + FHPVH T AT GSDG F+FWDKD++ +LK+
Sbjct: 297 DIYAVNALNFHPVHHTFATSGSDGGFNFWDKDSKQRLKT 335
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = -3
Query: 477 AAXQDXYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSG 298
A Y VN IAFHP++GT AT G DG + WD + +L S+ +F+ G
Sbjct: 262 AGRDTVYPVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDG 321
Query: 297 QIFAYAVGYDWSKGHEHYNPN 235
+ A A Y + +G + + P+
Sbjct: 322 HLLAVASSYTYEEGEKSHEPD 342
>01_05_0818 +
25468257-25468271,25468504-25468575,25469647-25469727,
25470008-25470049
Length = 69
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -3
Query: 327 LTKCAFNHSGQIFAYAVGYDWSKGHEHYNPN-KKTFIYLRASYE-ELKARP 181
+T FN G IFAYAV YDWSKG E +NP+ KT I+L + E E+K +P
Sbjct: 14 ITCSTFNQDGSIFAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKP 64
>07_03_1093 +
23912303-23912467,23912671-23912801,23913079-23913087,
23913146-23913228,23914494-23914596,23915988-23916066,
23916174-23916274,23916371-23916479
Length = 259
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 426 HGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEH 247
HGT AT G D + WD R KL S+ +F+ G++ A A Y + +G
Sbjct: 165 HGTFATGGCDRFVNLWDGANRRKLFQFPRYPSSIAALSFSRDGRLLAVASSYTYEEGDIP 224
Query: 246 YNPNKKTFIYLRASYE-ELKARP 181
+ P+ I++R E ++K RP
Sbjct: 225 HPPDA---IFIRDVNEVQVKPRP 244
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -3
Query: 420 TLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYN 241
T T ++G WD ++ KL + S+ AFNH+GQIFA A ++ + + N
Sbjct: 1225 TFVTGDNEGYVIAWDAQSKKKLHEFPIYSGSVASIAFNHNGQIFAVASNSNYQESDKICN 1284
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = -3
Query: 546 VXEPDQPPRTTSRSSATGPRARWAAXQDXYAVNDIAFHPVHGTLATVGSDGSFSFWDKDA 367
+ +P Q + ++SS + P ARW Q ++N I+F P LATVG DG +D
Sbjct: 313 IKDPAQLMISHAKSSKSNPIARWHVCQG--SINAISFSPDGAYLATVGRDGYLRVFDFSK 370
Query: 366 RTKLKSTELLDQSLTKCAFNHSGQ 295
+ + +L C ++ G+
Sbjct: 371 EQLIFGGKSYYGALLCCTWSSDGK 394
>11_01_0488 +
3770410-3770774,3771197-3771284,3771383-3771466,
3772128-3772224,3772324-3772411,3772800-3772848,
3773044-3773238,3773713-3774159
Length = 470
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = -3
Query: 513 SRSSATGPRARWAAXQDXYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLD 334
++SS + P ARW Q A+N I+F P LAT+G DG +D + +
Sbjct: 175 AKSSKSNPVARWHICQG--AINAISFSPDGTYLATIGRDGYLRVFDFAKEQLIFGGKSYF 232
Query: 333 QSLTKCAFNHSGQIFAYAV 277
+L C++ IF YA+
Sbjct: 233 GALLCCSWRTWKVIFDYAL 251
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -3
Query: 447 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 280
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 444 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 286
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -3
Query: 447 DIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYA 280
D+AF PV LAT +D + W D L LD+ L + AF+ SG A A
Sbjct: 278 DVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDR-LARLAFHPSGGYLATA 332
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 444 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFA 286
+AFHP G LAT D ++ WD +L E +S+ +F+ G + A
Sbjct: 320 LAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAA 372
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 33.1 bits (72), Expect = 0.22
Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 5/115 (4%)
Frame = -3
Query: 561 PXGHPVXEPDQPPRTTSR--SSATGPRARWAAXQDXYAVNDIAFHPVHGTLATVGS-DGS 391
P GH V E P S PR +V + FHP TL VGS +G
Sbjct: 304 PSGHGVDEATYPAPIPQPLWSVEDLPRTVACTLSQGSSVTSMDFHPTRHTLLLVGSTNGE 363
Query: 390 FSFWDKDARTKLKSTELLDQSLTKCA--FNHSGQIFAYAVGYDWSKGHEHYNPNK 232
+ W+ R +L S + C+ F S + A H + PN+
Sbjct: 364 ITLWEVGMRERLFSKPFKIWDIQACSPQFQVSFVVSGVAFAKHLIHLHAYQQPNE 418
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -3
Query: 453 VNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLD--QSLTKCAFNHSGQIFA 286
V + F + G D FWD D T L STE L + FN G + A
Sbjct: 568 VGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLA 625
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 254 TSTTTP-IRRRSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQPTDNAQCTALGMSTTD-C 81
++T +P R+ SF+ N+ H PT++ P D +QC+ + T + C
Sbjct: 494 SATYSPNTRKHSFSSSRFASNTHVRLHGQPTLELFAASNLTSPNDGSQCSLIASETEEMC 553
Query: 80 V 78
V
Sbjct: 554 V 554
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 444 IAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 295
I FHP LAT SD + FWD + + ST + FN G+
Sbjct: 213 IDFHPHEFLLATGSSDKTVKFWDLETFELIGSTGPETTGVRSMTFNPDGR 262
>05_01_0579 -
5196888-5196970,5197063-5197621,5197704-5197786,
5199165-5199279,5199376-5199473,5200136-5200183,
5200313-5200415,5201003-5201119,5201254-5201430,
5202563-5202593,5203492-5203604,5203824-5204036
Length = 579
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 254 TSTTTPIRRRSFTCEHLTKNSKRVRHNNP 168
T+T++P+RR C HL S + + NP
Sbjct: 152 TTTSSPLRRMESVCRHLLPASPPILYQNP 180
>09_03_0025 -
11665969-11666417,11666490-11666594,11666667-11666856,
11666933-11667120,11667240-11667571,11667654-11667940,
11668027-11668911
Length = 811
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 555 GHPVXEPDQPPRTTSRSSATGPRARWAAXQDXYAVND 445
G P PD P+T+ + TGPR R D +D
Sbjct: 321 GGPTIRPDPQPQTSKLADQTGPRKRKLVLDDDEGDDD 357
>06_02_0208 -
13026296-13026654,13027394-13027497,13028109-13028200,
13028418-13028774,13029932-13030109,13030454-13030507,
13030701-13030784,13031521-13031714
Length = 473
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -1
Query: 245 TTPIRRRSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQPTDNAQCTALGMSTTDCVCKQT 66
+TP +R C KNS+ ++ +I G+ Q +C A G+ C CKQ
Sbjct: 73 STPSTKRKKHCN--CKNSQCLKLACSSILDLFTGQIDQLYGYCECFAAGLYCDGCHCKQC 130
Query: 65 GN 60
GN
Sbjct: 131 GN 132
>10_01_0136 -
1639780-1639901,1640038-1640093,1641958-1642061,
1642119-1642301,1642963-1643073,1643175-1643330,
1644627-1644866,1646496-1646603,1646764-1647903
Length = 739
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 227 RSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQ 132
RSFTCEHL R ++P + GR P+
Sbjct: 565 RSFTCEHLMSVKVRCSEDDPMLWQKRFGRLPK 596
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 456 AVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQ 295
+V IA+H +G LATV D +D A ++ E +T F+ G+
Sbjct: 447 SVTKIAYHRANGLLATVADDMVLILFDTVAMKMVRRFEGHTDRVTDLCFSEDGK 500
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 537 PDQPPRTTSRSSATGPRARWA 475
P PPR T R+ PRA WA
Sbjct: 51 PRHPPRPTRRAHPASPRASWA 71
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -1
Query: 290 LPTRSGMTGLRVTSTTTPIRRRSFTCEHLTKNSKRVRHNNPTIDSSTPGRSPQPTDNAQC 111
LP+ S + T+T T RRR H ++KR + P S TP R+P P +
Sbjct: 8 LPSSSSSSSKTATATDTSDRRRH---HHHHNHTKRKKKPPPPPLSPTP-RTPPPAGSGSH 63
Query: 110 TALGMST 90
A+ S+
Sbjct: 64 RAMAASS 70
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -3
Query: 453 VNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTE 343
+N + P++ T+ T G D + WD + LK ++
Sbjct: 149 INRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESD 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,312,642
Number of Sequences: 37544
Number of extensions: 250346
Number of successful extensions: 972
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -