Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_D22
(1281 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 27 0.78
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 27 0.78
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 27 0.80
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 25 1.7
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 25 1.7
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 25 1.7
BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein. 27 1.9
AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein. 27 1.9
AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein. 27 1.9
AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein pr... 27 1.9
AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous ho... 29 2.2
AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens ... 29 2.3
AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein. 26 2.9
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 27 2.9
BC110382-1|AAI10383.1| 843|Homo sapiens sema domain, immunoglob... 26 2.9
AL133215-2|CAI10916.1| 843|Homo sapiens sema domain, immunoglob... 26 2.9
BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein. 26 2.9
AL133215-1|CAB92805.1| 838|Homo sapiens sema domain, immunoglob... 26 2.9
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 27 3.0
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 27 3.0
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 27 3.9
AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens ... 26 3.9
DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPas... 26 3.9
AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kin... 26 3.9
AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2 pr... 26 3.9
AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kin... 26 3.9
AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kin... 26 4.0
AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kin... 26 4.1
BC009723-1|AAH09723.1| 205|Homo sapiens Unknown (protein for IM... 26 5.5
BC037223-1|AAH37223.1| 194|Homo sapiens mediator complex subuni... 26 5.6
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 26 6.4
AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens ... 26 6.8
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 26 8.6
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 26 8.6
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 26 8.7
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 27.5 bits (58), Expect(2) = 0.78
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 603 PPPPPPPPPPGGPP 616
Score = 25.8 bits (54), Expect(2) = 0.78
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 596 GTDGPVPPPPPPPPP 610
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 27.5 bits (58), Expect(2) = 0.78
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 494 PPPPPPPPPPGGPP 507
Score = 25.8 bits (54), Expect(2) = 0.78
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 487 GTDGPVPPPPPPPPP 501
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 27.5 bits (58), Expect(2) = 0.80
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 185 PPPPPPPPPPGGPP 198
Score = 25.8 bits (54), Expect(2) = 0.80
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 178 GTDGPVPPPPPPPPP 192
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 24.6 bits (51), Expect(3) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 707 GVVPPPPPPPPP 718
Score = 23.0 bits (47), Expect(3) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPP PG
Sbjct: 715 PPPPPTPG 722
Score = 22.6 bits (46), Expect(3) = 1.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 476 PPPPPPGXXXNPP 438
PPPPPP PP
Sbjct: 763 PPPPPPIPAPLPP 775
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 24.6 bits (51), Expect(3) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 707 GVVPPPPPPPPP 718
Score = 23.0 bits (47), Expect(3) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPP PG
Sbjct: 715 PPPPPTPG 722
Score = 22.6 bits (46), Expect(3) = 1.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 476 PPPPPPGXXXNPP 438
PPPPPP PP
Sbjct: 763 PPPPPPIPAPLPP 775
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 24.6 bits (51), Expect(3) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 693 GVVPPPPPPPPP 704
Score = 23.0 bits (47), Expect(3) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPP PG
Sbjct: 701 PPPPPTPG 708
Score = 22.6 bits (46), Expect(3) = 1.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 476 PPPPPPGXXXNPP 438
PPPPPP PP
Sbjct: 749 PPPPPPIPAPLPP 761
>BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPPG P
Sbjct: 81 PPPPPPPGLSPRAP 94
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 72 GPPPPPPPPPPP 83
>AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein.
Length = 251
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPPG P
Sbjct: 81 PPPPPPPGLSPRAP 94
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 72 GPPPPPPPPPPP 83
>AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPPG P
Sbjct: 81 PPPPPPPGLSPRAP 94
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 72 GPPPPPPPPPPP 83
>AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPPG P
Sbjct: 76 PPPPPPPGLSPRAP 89
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 67 GPPPPPPPPPPP 78
>AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous
homologue 2_splice_variant1 protein.
Length = 1147
Score = 29.5 bits (63), Expect(2) = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 500 GGGXXXXPPPPPPP 459
GGG PPPPPPP
Sbjct: 538 GGGVPPPPPPPPPP 551
Score = 22.2 bits (45), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPP PG
Sbjct: 548 PPPPPLPG 555
>AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ34705 fis, clone MESAN2003035, highly similar to
Mus musculus diaphanous-related formin (Dia2) mRNA. ).
Length = 699
Score = 29.5 bits (63), Expect(2) = 2.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 500 GGGXXXXPPPPPPP 459
GGG PPPPPPP
Sbjct: 584 GGGVLPPPPPPPPP 597
Score = 22.2 bits (45), Expect(2) = 2.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPP PG
Sbjct: 594 PPPPPLPG 601
>AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein.
Length = 869
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 790 GEGAPAPPPPPPPPP 804
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 799 PPPPPPPAELTN 810
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 26.6 bits (56), Expect(2) = 2.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PP PPPPG PP
Sbjct: 368 PPAPPPPGLAPPPP 381
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 325 GPPLPPPPPPPP 336
>BC110382-1|AAI10383.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 764 GEGAPAPPPPPPPPP 778
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 773 PPPPPPPAELTN 784
>AL133215-2|CAI10916.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 764 GEGAPAPPPPPPPPP 778
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 773 PPPPPPPAELTN 784
>BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein.
Length = 838
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 759 GEGAPAPPPPPPPPP 773
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 768 PPPPPPPAELTN 779
>AL133215-1|CAB92805.1| 838|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 838
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 759 GEGAPAPPPPPPPPP 773
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 768 PPPPPPPAELTN 779
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 411 PPPPPPPPPPPPPP 424
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 408 GLPPPPPPPPPP 419
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 387 PPPPPPPPPPPPPP 400
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 384 GLPPPPPPPPPP 395
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 26.6 bits (56), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPP PG PP
Sbjct: 86 PPPPPSPGASYPPP 99
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 503 GGGGXXXXPPPPPPPG 456
G G PPPPPP G
Sbjct: 39 GAGLLAPGPPPPPPVG 54
>AK000342-1|BAA91097.1| 649|Homo sapiens protein ( Homo sapiens
cDNA FLJ20335 fis, clone HEP11429. ).
Length = 649
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 517 PPPPPPPPAAPLPP 530
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 510 GISALPPPPPPP 521
>DQ124707-1|AAZ38821.1| 578|Homo sapiens modulator of Na,K-ATPase
long form protein.
Length = 578
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 517 PPPPPPPPAAPLPP 530
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 510 GISALPPPPPPP 521
>AY274811-1|AAP42076.1| 578|Homo sapiens PX serine/threonine kinase
protein.
Length = 578
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 517 PPPPPPPPAAPLPP 530
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 510 GISALPPPPPPP 521
>AY437879-1|AAR98521.1| 545|Homo sapiens PX ser/thr kinase v2
protein.
Length = 545
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 484 PPPPPPPPAAPLPP 497
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 477 GISALPPPPPPP 488
>AY847220-1|AAX73352.1| 495|Homo sapiens PX serine/threonine kinase
isoform 5 protein.
Length = 495
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 434 PPPPPPPPAAPLPP 447
Score = 24.6 bits (51), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 427 GISALPPPPPPP 438
>AY847221-1|AAX73353.1| 441|Homo sapiens PX serine/threonine kinase
isoform 4 protein.
Length = 441
Score = 26.2 bits (55), Expect(2) = 4.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 380 PPPPPPPPAAPLPP 393
Score = 24.6 bits (51), Expect(2) = 4.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 373 GISALPPPPPPP 384
>AY847222-1|AAX73354.1| 352|Homo sapiens PX serine/threonine kinase
isoform 3 protein.
Length = 352
Score = 26.2 bits (55), Expect(2) = 4.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 479 PPPPPPPGXXXNPP 438
PPPPPPP PP
Sbjct: 291 PPPPPPPPAAPLPP 304
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 494 GXXXXPPPPPPP 459
G PPPPPPP
Sbjct: 284 GISALPPPPPPP 295
>BC009723-1|AAH09723.1| 205|Homo sapiens Unknown (protein for
IMAGE:3895048) protein.
Length = 205
Score = 25.8 bits (54), Expect(2) = 5.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 500 GGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 22 GFGPGKPPPPPPPP 35
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 479 PPPPPPPGXXXNP 441
PPPPPPP P
Sbjct: 28 PPPPPPPPAGGGP 40
>BC037223-1|AAH37223.1| 194|Homo sapiens mediator complex subunit
19 protein.
Length = 194
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 500 GGGXXXXPPPPPPP 459
G G PPPPPPP
Sbjct: 22 GFGPGKPPPPPPPP 35
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 479 PPPPPPPGXXXNP 441
PPPPPPP P
Sbjct: 28 PPPPPPPPAGGGP 40
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ45114 fis, clone BRAWH3034775, highly similar
to Homo sapiens E1B-55kDa-associated protein 5
(E1B-AP5). ).
Length = 752
Score = 25.8 bits (54), Expect(2) = 6.4
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -2
Query: 542 PXKKXPXFFXXXWGGGGXXXXPPPPPPP 459
P P + + G PPPPPPP
Sbjct: 651 PSYSQPPYNQGGYSQGYTAPPPPPPPPP 678
Score = 24.2 bits (50), Expect(2) = 6.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 670 PPPPPPPPPAYN 681
>AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens
cDNA FLJ11393 fis, clone HEMBA1000591, weakly similar to
PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 390
Score = 25.8 bits (54), Expect(2) = 6.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -2
Query: 542 PXKKXPXFFXXXWGGGGXXXXPPPPPPP 459
P P + + G PPPPPPP
Sbjct: 289 PSYSQPPYNQGGYSQGYTAPPPPPPPPP 316
Score = 24.2 bits (50), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 479 PPPPPPPGXXXN 444
PPPPPPP N
Sbjct: 308 PPPPPPPPPAYN 319
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 26.2 bits (55), Expect(2) = 8.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPPPPG
Sbjct: 350 PPPPPPPG 357
Score = 23.4 bits (48), Expect(2) = 8.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 503 GGGGXXXXPPPPPP 462
G G PPPPPP
Sbjct: 343 GPAGGAAPPPPPPP 356
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 26.2 bits (55), Expect(2) = 8.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPPPPG
Sbjct: 344 PPPPPPPG 351
Score = 23.4 bits (48), Expect(2) = 8.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 503 GGGGXXXXPPPPPP 462
G G PPPPPP
Sbjct: 337 GPAGGAAPPPPPPP 350
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 26.2 bits (55), Expect(2) = 8.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 479 PPPPPPPG 456
PPPPPPPG
Sbjct: 316 PPPPPPPG 323
Score = 23.4 bits (48), Expect(2) = 8.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 503 GGGGXXXXPPPPPP 462
G G PPPPPP
Sbjct: 309 GPAGGAAPPPPPPP 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,138,637
Number of Sequences: 237096
Number of extensions: 1936180
Number of successful extensions: 26150
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19059
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18385440820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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