Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_D13
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA...    32   0.91 
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    29   4.9  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    29   4.9  
BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p pro...    29   6.4  
BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p pro...    29   6.4  
AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,...    29   6.4  
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   8.5  

>AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA
           protein.
          Length = 588

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 182 PLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 292
           PL  +N  EV   PR++L+P  +A P  A+P  P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +1

Query: 367 RNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGXAPHGLTPSGRPLTFTGGE 525
           R  PL   +   S     ST + +H  ++      A  GLTPS  P T  GGE
Sbjct: 668 RGQPLKMRKSHSSAES--STSQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGE 718


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +1

Query: 367 RNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGXAPHGLTPSGRPLTFTGGE 525
           R  PL   +   S     ST + +H  ++      A  GLTPS  P T  GGE
Sbjct: 786 RGQPLKMRKSHSSAES--STSQKSHKGSSPTPTPTASPGLTPSPSPPTSAGGE 836


>BT030286-1|ABN49425.1|  649|Drosophila melanogaster IP18554p
           protein.
          Length = 649

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +1

Query: 361 VSRNTPLDQNQPAGSG---RDTPSTGRSNHSTAARXSAGXAPHGLTPSGRPLT 510
           VS +  LD +  +GS    +  P T RSN    A  SAG +    TP  RP T
Sbjct: 524 VSSSGGLDNHSASGSHSPPKPMPRTSRSNSLPEASDSAGESSSTNTPRPRPRT 576


>BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p
           protein.
          Length = 1041

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 6   FFFFSGRGPNLLRGPRAKGARGVCETQRSAWCCE 107
           + FF+G   NL+    +   RG+ + Q SA  CE
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,
           isoform A protein.
          Length = 1041

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 6   FFFFSGRGPNLLRGPRAKGARGVCETQRSAWCCE 107
           + FF+G   NL+    +   RG+ + Q SA  CE
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 412 RVPTRQAGSGPAGYSGTPAAPXGRPDGLP 326
           R PTR  G+G +G S  P+ P  +P   P
Sbjct: 329 RKPTRTPGTGSSGGSSKPSKPKRKPTSKP 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,652,520
Number of Sequences: 53049
Number of extensions: 676403
Number of successful extensions: 3395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)