Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_D11
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   3.4  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   3.4  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/50 (30%), Positives = 15/50 (30%)
 Frame = +2

Query: 470 PPPXXXXXXXPXXPXXXXPPXPXXVXXPAGXXAXXXXPTQXPPPXXXPXP 619
           P P       P  P    PP P     P    A    PT  P P   P P
Sbjct: 336 PAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAP 385


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/50 (30%), Positives = 15/50 (30%)
 Frame = +2

Query: 470 PPPXXXXXXXPXXPXXXXPPXPXXVXXPAGXXAXXXXPTQXPPPXXXPXP 619
           P P       P  P    PP P     P    A    PT  P P   P P
Sbjct: 336 PAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAP 385


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.146    0.488 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,293,413
Number of Sequences: 53049
Number of extensions: 161596
Number of successful extensions: 650
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)