Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_D07
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 269 2e-72
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 269 2e-72
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 269 2e-72
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 269 2e-72
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 269 2e-72
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 269 2e-72
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 253 1e-67
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 253 1e-67
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 202 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 260
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 317
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 318 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 377
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 378 TTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 202 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 260
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 317
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 318 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 377
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 378 TTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 104 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 162
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 163 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 219
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 220 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 279
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 280 TTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 202 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 260
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 317
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 318 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 377
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 378 TTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 104 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 162
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 163 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 219
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 220 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 279
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 280 TTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 269 bits (659), Expect = 2e-72
Identities = 130/199 (65%), Positives = 154/199 (77%)
Frame = -2
Query: 694 EKPIPVDXXFAQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPX 515
EK + VD FAQDEMID IGVT+G V+ T +K PRKTHK RKVACIGAWHP
Sbjct: 202 EKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPS 260
Query: 514 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 335
RV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGF
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGF 317
Query: 334 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 155
P YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQ
Sbjct: 318 PRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQ 377
Query: 154 TPADKAAFMGTLKKDRIRE 98
T A+K AFMG LK+D + E
Sbjct: 378 TTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 122/189 (64%), Positives = 146/189 (77%)
Frame = -2
Query: 664 AQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPXRVSFTVARAG 485
A +MID IGVT+G V+ T +K PRKTHK RKVACIGAWHP RV+FTVARAG
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 222
Query: 484 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 223 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 279
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 280 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 339
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 340 KLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 122/189 (64%), Positives = 146/189 (77%)
Frame = -2
Query: 664 AQDEMIDCIGVTKGQRIPKVSXXVGTQRKXPRKTHKXXRKVACIGAWHPXRVSFTVARAG 485
A +MID IGVT+G V+ T +K PRKTHK RKVACIGAWHP RV+FTVARAG
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHT-KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAG 222
Query: 484 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 305
QKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D+
Sbjct: 223 QKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDY 279
Query: 304 VMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMG 125
+M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG
Sbjct: 280 IMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 339
Query: 124 TLKKDRIRE 98
LK+D + E
Sbjct: 340 KLKRDFLAE 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,167,694
Number of Sequences: 27780
Number of extensions: 343254
Number of successful extensions: 807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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