Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_D02
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 1.5
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 1.5
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.6
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.6
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.6
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 29 4.6
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 6.1
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 460 PTANTCQARTSTHFTGKTCIRQRTPNTAASPDTNAPDVLSYR--SRRLXMCQFFFPAETC 633
P+ ++CQ+ S+ T TCIR N+ ++ + + R S+ L +C TC
Sbjct: 90 PSCSSCQSACSSACTTPTCIRTCQRNSCSNLCNTGSNSCTNRCNSQCLQICTTPSCTNTC 149
Query: 634 LLSCLLAC 657
SC AC
Sbjct: 150 SNSCSNAC 157
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAAS 549
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAAS 549
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAASPDTNAP 567
P+TT T P T T KPT +T + ++T T + TP + + P
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 568 DVLS 579
L+
Sbjct: 657 VTLT 660
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +1
Query: 388 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAASPDTNAP 567
P+TT T P T T KPT +T + ++T T + TP + + P
Sbjct: 597 PSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKP 656
Query: 568 DVLS 579
L+
Sbjct: 657 VTLT 660
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -3
Query: 199 PILEPPRSGCTCARVRHLVGDCAVAGPTRDVNVCVPELQC 80
P +P + C+C + C+ A P + VP QC
Sbjct: 45 PYTQPQETSCSCQNTAPVQTSCSCAQPVQQQTYLVPTSQC 84
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 306 AEVSPSATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTR 437
A + P+ T S + PP TA + + NF+G+ S+TR
Sbjct: 205 AGILPATTTNVSAAVPPPSSRATANVFSGNSIGLNFSGAASVTR 248
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = +1
Query: 385 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAASPDT 558
LP TT+ T+ P + + +KPT T T K P T P T
Sbjct: 591 LPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTT 648
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +1
Query: 394 TTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRTPNTAASPDT 558
TT TTI P + T PT T T T T T ++ TP T +P T
Sbjct: 163 TTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTPTT 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,387,656
Number of Sequences: 27780
Number of extensions: 356043
Number of successful extensions: 1196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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