Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C23
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   312   5e-85
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   312   5e-85
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   312   5e-85
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   312   5e-85
BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   305   5e-83

>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  312 bits (765), Expect = 5e-85
 Identities = 155/233 (66%), Positives = 175/233 (75%)
 Frame = -2

Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSLSIXCXPKMK*LTALVSPRAKDTKVSLXVG 591
           KAH+M   L       KVKWA+    + + +S     + + +  +   + K  K      
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVS-NVFGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 590 TQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 411
             +  P +  K  RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295

Query: 410 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 231
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355

Query: 230 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  312 bits (765), Expect = 5e-85
 Identities = 155/233 (66%), Positives = 175/233 (75%)
 Frame = -2

Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSLSIXCXPKMK*LTALVSPRAKDTKVSLXVG 591
           KAH+M   L       KVKWA+    + + +S     + + +  +   + K  K      
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVS-NVFGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 590 TQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 411
             +  P +  K  RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282

Query: 410 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 231
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342

Query: 230 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  312 bits (765), Expect = 5e-85
 Identities = 155/233 (66%), Positives = 175/233 (75%)
 Frame = -2

Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSLSIXCXPKMK*LTALVSPRAKDTKVSLXVG 591
           KAH+M   L       KVKWA+    + + +S     + + +  +   + K  K      
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVS-NVFGQDEMIDCVGVTKGKGFKGVTSRW 222

Query: 590 TQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 411
             +  P +  K  RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282

Query: 410 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 231
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342

Query: 230 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  312 bits (765), Expect = 5e-85
 Identities = 155/233 (66%), Positives = 175/233 (75%)
 Frame = -2

Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSLSIXCXPKMK*LTALVSPRAKDTKVSLXVG 591
           KAH+M   L       KVKWA+    + + +S     + + +  +   + K  K      
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVS-NVFGQDEMIDCVGVTKGKGFKGVTSRW 235

Query: 590 TQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 411
             +  P +  K  RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295

Query: 410 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 231
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355

Query: 230 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 72
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408


>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  305 bits (748), Expect = 5e-83
 Identities = 151/227 (66%), Positives = 171/227 (75%)
 Frame = -2

Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSLSIXCXPKMK*LTALVSPRAKDTKVSLXVG 591
           KAH+M   L       KVKWA+    + + +S     + + +  +   + K  K      
Sbjct: 188 KAHVMEIQLNGGSIEDKVKWAREHLEKPIQVS-NVFGQDEMIDCVGVTKGKGFKGVTSRW 246

Query: 590 TQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 411
             +  P +  K  RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KD
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 306

Query: 410 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 231
           GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HT
Sbjct: 307 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 366

Query: 230 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
           KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 367 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,546,740
Number of Sequences: 53049
Number of extensions: 736110
Number of successful extensions: 1948
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)