Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_C23
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 230 1e-60
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 230 1e-60
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 230 1e-60
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 230 1e-60
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 230 1e-60
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 230 1e-60
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 229 2e-60
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 229 2e-60
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 234
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 234
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 79 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 136
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 196
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 197 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 253
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 254 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 234
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 79 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 136
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 196
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 197 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 253
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 254 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 230 bits (562), Expect = 1e-60
Identities = 118/228 (51%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Frame = -2
Query: 770 KAHIMXSXLTXVPFGXKVKWAQRTXWRNLSL-SIXCXPKMK*LTALVSPRAKDTKVSLXV 594
KAH++ + KV WA+ + + + ++ +M + + R K
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM--IDTIGVTRGHGFKGVTSR 234
Query: 593 GTQRSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 414
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ +
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTE 294
Query: 413 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 234
+GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL
Sbjct: 295 EGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQ 351
Query: 233 TKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 352 TKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (560), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -1
Query: 669 VXAQDEMIDCIXXXXXXXXXXXXXRWHTKKLPRKTHQG 556
V A +MID I RWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (560), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K RKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -1
Query: 669 VXAQDEMIDCIXXXXXXXXXXXXXRWHTKKLPRKTHQG 556
V A +MID I RWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,583,003
Number of Sequences: 27780
Number of extensions: 373026
Number of successful extensions: 911
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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