Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C17
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.83 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   4.5  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 442  GATKGATGTPGYGKIVGLIG 383
            G+  G  GTPG GK  G+IG
Sbjct: 2057 GSISGGGGTPGGGKSKGIIG 2076


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 377 MGV-LIMSAPMGLSCPHSSFPPTSLGCPLMGTHF 279
           +GV +++S  + L+    + P TS   PL+GT+F
Sbjct: 248 LGVTILLSLTVFLNMVAETMPATSDAVPLLGTYF 281


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 377 MGV-LIMSAPMGLSCPHSSFPPTSLGCPLMGTHF 279
           +GV +++S  + L+    + P TS   PL+GT+F
Sbjct: 280 LGVTILLSLTVFLNMVAETMPATSDAVPLLGTYF 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,047
Number of Sequences: 2352
Number of extensions: 14288
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)