Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_C17
(763 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 34 0.24
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 34 0.24
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 33 0.56
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 33 0.56
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 33 0.56
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 33 0.56
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 33 0.56
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 31 1.3
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 30 3.0
AY069177-1|AAL39322.1| 640|Drosophila melanogaster GH22493p pro... 29 5.2
AE014296-2139|AAF49919.2| 640|Drosophila melanogaster CG10704-P... 29 5.2
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 6.9
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 6.9
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 6.9
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 9.2
AE014297-4747|AAF57152.1| 714|Drosophila melanogaster CG17998-P... 29 9.2
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY SN I + ++EEF ++ E P+
Sbjct: 88 RIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSETIKSHPN 141
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY SN I + ++EEF ++ E P+
Sbjct: 873 RIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSETIKSHPN 926
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 757 RIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 810
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 873 RIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 873 RIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 835 RIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 888
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 873 RIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 655 KLQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFIRRXARNLYERADGGPH 494
++Q ++N R I AGRY N I V ++EEF ++ E P+
Sbjct: 885 RVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFSETIKSHPN 938
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 372 SAHNECPHGTELSTLVISPHIVGVPPYGDPF-PTPVG 265
SA PHGT + L P V PP P PT +G
Sbjct: 1938 SAAGSLPHGTSVQKLTTRPAAVAPPPPAHPLTPTSIG 1974
>AY069177-1|AAL39322.1| 640|Drosophila melanogaster GH22493p
protein.
Length = 640
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 280 SHPRWVDHSPLWGVI-ISVPPRDG 212
S P W H PLWG + ++ PP G
Sbjct: 261 SFPTWPAHHPLWGAVPLATPPGGG 284
>AE014296-2139|AAF49919.2| 640|Drosophila melanogaster CG10704-PA
protein.
Length = 640
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 280 SHPRWVDHSPLWGVI-ISVPPRDG 212
S P W H PLWG + ++ PP G
Sbjct: 261 SFPTWPAHHPLWGAVPLATPPGGG 284
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 372 SAHNECPHGTELSTLVISPHIVGVPPYGDPF-PTPVG 265
SA PHGT + L P V PP P PT G
Sbjct: 2073 SAAGSLPHGTSVQKLTTRPAAVAPPPPAHPLTPTSTG 2109
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 372 SAHNECPHGTELSTLVISPHIVGVPPYGDPF-PTPVG 265
SA PHGT + L P V PP P PT G
Sbjct: 2073 SAAGSLPHGTSVQKLTTRPAAVAPPPPAHPLTPTSTG 2109
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 372 SAHNECPHGTELSTLVISPHIVGVPPYGDPF-PTPVG 265
SA PHGT + L P V PP P PT G
Sbjct: 2073 SAAGSLPHGTSVQKLTTRPAAVAPPPPAHPLTPTSTG 2109
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 652 LQAQQNXAXRTIVGAGRYVSNAVIARDLDVXSLEEFI 542
+Q Q+ RTI GA YV + I RDL++ S+ I
Sbjct: 814 IQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAI 850
>AE014297-4747|AAF57152.1| 714|Drosophila melanogaster CG17998-PA
protein.
Length = 714
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 253 GSGPPNGGGKWVPIRGHPNDV 315
G G GGGK VP+ G+P+++
Sbjct: 220 GGGEGGGGGKCVPVGGYPDEL 240
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,423,232
Number of Sequences: 53049
Number of extensions: 727904
Number of successful extensions: 1764
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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