Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_C16
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 151 4e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 151 4e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 151 4e-37
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 199 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 259 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 199 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 259 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 101 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 160
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 161 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 119 bits (287), Expect = 2e-27
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = -1
Query: 633 VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMN 454
V+ G +GVT RWHTKKLPRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N
Sbjct: 174 VTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIIN 233
Query: 453 KKIYRIG 433
KIYRIG
Sbjct: 234 NKIYRIG 240
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 199 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 259 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 101 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 160
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 161 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 97 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 143
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 119 bits (287), Expect = 2e-27
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = -1
Query: 633 VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMN 454
V+ G +GVT RWHTKKLPRKTHK RKVACIGAWHP RV+FTVARAGQKG+HHRT +N
Sbjct: 174 VTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIIN 233
Query: 453 KKIYRIG 433
KIYRIG
Sbjct: 234 NKIYRIG 240
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 4e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 398 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 219
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 218 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 126 bits (304), Expect = 2e-29
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 699 ENIWRNLSL*XXFAQDE*LTAL-VSPGXRIQGVTXRWHTKKLPRKTHKXXRKVACIGAWH 523
E++ + + + FAQDE + + V+ G +GVT RWHTKKLPRKTHK RKVACIGAWH
Sbjct: 199 EHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 258
Query: 522 PXRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
P RV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 259 PSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 709 EWAREHLEKPIPV-IXXCPR*MIDCIGFTRXKDTRCHXSLAHKEVTP 572
+WAREHLEK + V MID IG TR + S H + P
Sbjct: 195 DWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP 241
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 612 QGVTXRWHTKKLP-RKTHKXXRKVACIGAWHPXRVSFTVARAGQKGYHHRTEMNKKIYRI 436
QG RW + P R+T K R++ +G+ R+ G GY RT +I RI
Sbjct: 236 QGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 500
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,233,054
Number of Sequences: 27780
Number of extensions: 366391
Number of successful extensions: 849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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