Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_C15
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 35 0.054
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 35 0.054
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 33 0.16
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 33 0.16
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 33 0.22
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 33 0.22
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 33 0.22
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 32 0.50
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 31 0.66
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 30 2.0
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 29 4.7
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 28 6.2
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 199 YGKKRSCSLKPSTSIQNYLLPVQETASDYLKRKRSCSPKPSTSTQ 65
Y K + SL P+ S++N+ +P ++T + K + +P PS+ST+
Sbjct: 1179 YSKASTTSLIPTLSLKNFRIPKKDTVEEEKKDVKEEAPGPSSSTE 1223
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 199 YGKKRSCSLKPSTSIQNYLLPVQETASDYLKRKRSCSPKPSTSTQ 65
Y K + SL P+ S++N+ +P ++T + K + +P PS+ST+
Sbjct: 1179 YSKASTTSLIPTLSLKNFRIPKKDTVEEEKKDVKEEAPGPSSSTE 1223
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 YGKKRSCSLKPSTSIQNYLLPVQETA--SDYLKRKRSCSPKPSTSTQKHVSTTQATATAP 26
+ K+ + +P +S+Q L +Q+ SD ++ + PK + +K V+ A+A AP
Sbjct: 24 FQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKPKKNEKRKKAVAQAPASAPAP 83
Query: 25 DNLKKKKK 2
+KKK+
Sbjct: 84 GPEEKKKQ 91
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 YGKKRSCSLKPSTSIQNYLLPVQETA--SDYLKRKRSCSPKPSTSTQKHVSTTQATATAP 26
+ K+ + +P +S+Q L +Q+ SD ++ + PK + +K V+ A+A AP
Sbjct: 24 FQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKPKKNEKRKKAVAQAPASAPAP 83
Query: 25 DNLKKKKK 2
+KKK+
Sbjct: 84 GPEEKKKQ 91
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 193 KKRSCSLKPSTSIQNYLLPVQETA--SDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDN 20
K+ + +P +S+Q L +Q+ SD ++ + PK + +K V+ A+A AP
Sbjct: 49 KQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKPKKNEKRKKAVAQAPASAPAPGP 108
Query: 19 LKKKKK 2
+KKK+
Sbjct: 109 EEKKKQ 114
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 193 KKRSCSLKPSTSIQNYLLPVQETA--SDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDN 20
K+ + +P +S+Q L +Q+ SD ++ + PK + +K V+ A+A AP
Sbjct: 10 KQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKPKKNEKRKKAVAQAPASAPAPGP 69
Query: 19 LKKKKK 2
+KKK+
Sbjct: 70 EEKKKQ 75
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 193 KKRSCSLKPSTSIQNYLLPVQETA--SDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDN 20
K+ + +P +S+Q L +Q+ SD ++ + PK + +K V+ A+A AP
Sbjct: 49 KQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKPKKNEKRKKAVAQAPASAPAPGP 108
Query: 19 LKKKKK 2
+KKK+
Sbjct: 109 EEKKKQ 114
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -3
Query: 178 SLKPSTSIQNYLLPVQETASDYLKRKRSCSPKPSTSTQKHVSTTQATATAP 26
+LKP+TS + + + T+ + + P+TS QK+ +T +AT++ P
Sbjct: 170 TLKPTTSPEKHSTTEEATSPSQNETTSVTTQNPTTSNQKNETTDEATSSPP 220
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 272 FACIVQA-HNYCKHIQNEPCRLHQSLWEEKVLQPKTFNIDSKLPITCPGNCIRLFKKEKI 96
F C+ A ++ C+ + + LH ++++PK I S + P N + + KI
Sbjct: 196 FKCLECADYDLCEKCERKS--LHYEHAMIRIVEPKKTMIPSYVTSNSPNNVFPTYMQHKI 253
Query: 95 VQPQTFNIDSKTCI 54
QPQT +KT I
Sbjct: 254 QQPQTIKGINKTVI 267
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = -3
Query: 268 HA*YKHTIIVSIYRTNPAVSISHYGKKRSCSLKPSTSIQNYLLPVQETASDYLKRKRSCS 89
HA K I Y T P S Y S S+ T+ + Y PV SDY ++ +
Sbjct: 321 HAASKKYPIAPTYETTP----SSYDTTPSYSVPSYTAPKKY--PVASPPSDYAQKPSYSA 374
Query: 88 PKPSTSTQKHVSTTQAT-ATAP 26
P PS T + T+ A AP
Sbjct: 375 PSPSGYTSNFEAPTETNYAPAP 396
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 181 CSLKPSTSIQ--NYLLPVQETASDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDNLK 14
CS +P ++Q + ++ A+ RKR SP+PSTS+ + + + A LK
Sbjct: 66 CSWEPIENLQCDRMIQEYEKEAAKRTTRKRRYSPQPSTSSSAELQPSTSDEWAGKTLK 123
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 184 SCSLKPSTSIQNYLLPVQETASDY-LKRKRSCSPKPSTSTQKHVSTTQATAT 32
S + KP+T V T + + + +P PS +T+K +TT TAT
Sbjct: 566 STTTKPTTLSTTTTTQVPSTTTSVTVPSTQKATPSPSRTTKKSTTTTSTTAT 617
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 181 CSLKPSTSIQ--NYLLPVQETASDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDNLK 14
CS +P ++Q + ++ A+ RKR SP+PSTS+ + + + A LK
Sbjct: 66 CSWEPIENLQCDRMIQEYEKEAAKRTTRKRRYSPQPSTSSSAELQPSTSDEWAGKTLK 123
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 206 QSLWEEKVLQPKTFNIDSKLPITCPGNCIRLFKKEKIVQPQTFN-IDSKTCINYPGN 39
+ +W + + + K +N+ P+ PG R+FK EK+V F+ ++ C+N P N
Sbjct: 534 EQIWPD-IKELKVWNMVEFPPVK-PGQLRRIFKGEKLVNETGFDLLNGMLCLN-PAN 587
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 326 HLQXDATNPSIXXCSKDFFACIVQAHNYCKHIQNEPCRLHQSLWEEKVLQPKTFNIDSKL 147
HL D + I +D + A N K + ++HQS E V+ + I SK+
Sbjct: 175 HLFKDLEDKWIKDAVRDHSGNLANALNQLKTFEASTRKVHQSFVSEAVMLEEVSKIRSKI 234
Query: 146 P 144
P
Sbjct: 235 P 235
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -3
Query: 193 KKRSCSLKPSTSIQNYLLPVQETASDYLKRKRSCSPKPSTSTQKHVSTTQATATAPDNLK 14
KK+ K +S + +++ D K+K+ S K S+ S + ++ + D+ K
Sbjct: 99 KKKKKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKDSSDDSSDSSDSSDSSDSSDDDK 158
Query: 13 KKKK 2
KKKK
Sbjct: 159 KKKK 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,094
Number of Sequences: 27780
Number of extensions: 256976
Number of successful extensions: 776
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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