Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C13
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical...    33   0.16 
AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical...    32   0.49 
U41007-17|AAA82261.1|  507|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AL132943-12|CAB81978.3|  514|Caenorhabditis elegans Hypothetical
           protein Y116F11B.9a protein.
          Length = 514

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 612 PXXEIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           P   +  + Q AA+  CL +   SA ++  +D+D+V++P
Sbjct: 241 PFVGVEFQNQAAAYTDCLLQYKESAQFITFLDIDDVIIP 279


>AL031635-10|CAA21037.2|  492|Caenorhabditis elegans Hypothetical
           protein Y47D3B.4 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 573 FNXCLYRXMSSAGWLLVIDVDEVVLP 496
           +N C Y  + +  ++L+ID+DEV++P
Sbjct: 317 YNDCFYNYIHTHRYVLIIDIDEVIVP 342


>U41007-17|AAA82261.1|  507|Caenorhabditis elegans Hypothetical
           protein C33H5.2 protein.
          Length = 507

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 603 EIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           +I    Q AA   CL +   SA +L  +D+D+V++P
Sbjct: 234 QIEFRSQTAAQTDCLLQYKESAQYLAFLDLDDVLIP 269


>Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical
           protein F55C10.4 protein.
          Length = 517

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -3

Query: 618 LYPXXEIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLPH 493
           L P   +    Q  A   CL +   SA ++  +D+D++++P+
Sbjct: 230 LEPNRNVELRNQAGAHTDCLLKYKESASFIGSLDMDDILIPN 271


>Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical
           protein F13G3.3 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 612 PXXEIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           P   +    Q AA   CL R   S+ ++  +D+D++++P
Sbjct: 227 PNLNVEFRSQAAAQTDCLLRYKESSEFVAFVDLDDLIIP 265


>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -3

Query: 612 PXXEIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           P  +I    Q A+   CL +   SA ++  +D+D+V++P
Sbjct: 272 PYNQIEFRNQAASQTDCLLQFKESARFITFLDLDDVLIP 310


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 603 EIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           +I    Q AA   CL +   SA ++  +D+D+V++P
Sbjct: 207 QIEFRNQAAAQTDCLLQFKESARFITFLDLDDVLIP 242


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 603 EIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           +I    Q AA   CL +   SA ++  +D+D+V++P
Sbjct: 234 QIEFRNQAAAQTDCLLQFKESARFITFLDLDDVLIP 269


>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -1

Query: 305 KNRSKYALRPRDAVELGNHFLWELAPGASSVGVPTDRALLHHYR 174
           +++ K  +RP +   +  H   ++  G   + VP D   + HYR
Sbjct: 421 RDQPKCIIRPENVAMMSIHGPKDMYKGKKKIVVPEDTGFIRHYR 464


>AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical
           protein F07G11.4 protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = -3

Query: 603 EIRTEGQXAAFNXCLYRXMSSAGWLLVIDVDEVVLP 496
           +I    Q AA + CL +   +A ++  +D+D++++P
Sbjct: 228 QIELRSQVAAQSDCLLQYKEAARFITFLDLDDILIP 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,267,377
Number of Sequences: 27780
Number of extensions: 225221
Number of successful extensions: 653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)