Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C10
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387...    43   2e-04
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170...    40   0.002

>12_02_1200 +
           26937624-26937674,26937913-26938005,26938582-26938728,
           26940299-26940379,26940711-26940849,26940977-26941013,
           26941095-26941202,26941434-26941533,26941638-26941783,
           26941862-26941953,26942086-26942180,26942435-26942531,
           26942623-26942766,26942912-26943129,26943213-26943323
          Length = 552

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 531 PFWDIKGCYTAQFEHTILLRPTCQ 460
           P  D++G Y +QFEHTILLRPTC+
Sbjct: 520 PLCDVRGSYVSQFEHTILLRPTCK 543



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = -2

Query: 668 KXLXG-INKNFGTLGFXKXWXERXGAFS*RDGXEGXXXXXXXGRXPAPFGTSRGVTPHSS 492
           K L G IN NFGTL F + + +R G        +           P P    RG      
Sbjct: 474 KQLLGTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDVGIVQPYP-PLCDVRGSYVSQF 532

Query: 491 NTPSCSDPPAKEVVSRGDDY 432
                  P  KEV+SRGDDY
Sbjct: 533 EHTILLRPTCKEVISRGDDY 552


>08_02_1441 -
           27116242-27116354,27116646-27116742,27116841-27117058,
           27117279-27117422,27117512-27117608,27117932-27118026,
           27118140-27118231,27118326-27118471,27118565-27118664,
           27118857-27118964,27119040-27119085,27119210-27119345,
           27119847-27120044
          Length = 529

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 531 PFWDIKGCYTAQFEHTILLRPTCQ 460
           P  D++G Y +Q EHTILLRPTC+
Sbjct: 464 PMCDVRGSYVSQSEHTILLRPTCK 487



 Score = 31.5 bits (68), Expect = 0.73
 Identities = 23/77 (29%), Positives = 30/77 (38%)
 Frame = -2

Query: 671 EKXLXGINKNFGTLGFXKXWXERXGAFS*RDGXEGXXXXXXXGRXPAPFGTSRGVTPHSS 492
           ++ L  IN NFGTL F + + +R G        +           P P    RG     S
Sbjct: 418 KQLLVTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDAGIVEPCP-PMCDVRGSYVSQS 476

Query: 491 NTPSCSDPPAKEVVSRG 441
                  P  KEV+SRG
Sbjct: 477 EHTILLRPTCKEVISRG 493


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,128
Number of Sequences: 37544
Number of extensions: 341960
Number of successful extensions: 676
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)