Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C10
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...    45   7e-05
Z81086-5|CAB03119.2|  182|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -1

Query: 531 PFWDIKGCYTAQFEHTILLRPT 466
           P  D+KGCYTAQ+EHTIL+RPT
Sbjct: 412 PLCDVKGCYTAQWEHTILMRPT 433



 Score = 36.3 bits (80), Expect = 0.023
 Identities = 24/74 (32%), Positives = 29/74 (39%)
 Frame = -2

Query: 653 INKNFGTLGFXKXWXERXGAFS*RDGXEGXXXXXXXGRXPAPFGTSRGVTPHSSNTPSCS 474
           I+KNF TL F + W +R G        +           P P    +G            
Sbjct: 372 IDKNFATLAFCRRWIDRLGETKYLMALKDLCDKGIVDPYP-PLCDVKGCYTAQWEHTILM 430

Query: 473 DPPAKEVVSRGDDY 432
            P  KEVVSRGDDY
Sbjct: 431 RPTVKEVVSRGDDY 444



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 598 GPFRNAMAXKDXWDKGVVDAYPPLLGHQG 512
           G  +  MA KD  DKG+VD YPPL   +G
Sbjct: 390 GETKYLMALKDLCDKGIVDPYPPLCDVKG 418


>Z81086-5|CAB03119.2|  182|Caenorhabditis elegans Hypothetical
           protein F53B6.5 protein.
          Length = 182

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 653 INKNFGTLGFXKXWXERXG 597
           I+KNF TL F + W +R G
Sbjct: 123 IDKNFATLAFCRCWIDRLG 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,910,226
Number of Sequences: 27780
Number of extensions: 308633
Number of successful extensions: 561
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)