Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C10
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   5.3  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   5.3  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   5.3  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   5.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.3  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   9.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.2  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 27  WGYNMKDAEKKRFRFFFVLRHINLPTQKYFGVIIKKVPRPL 149
           + YN  +  KK +     +  I +P   Y+G  +   PRP+
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL---PRPM 134


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 27  WGYNMKDAEKKRFRFFFVLRHINLPTQKYFGVIIKKVPRPL 149
           + YN  +  KK +     +  I +P   Y+G  +   PRP+
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL---PRPM 134


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 27  WGYNMKDAEKKRFRFFFVLRHINLPTQKYFGVIIKKVPRPL 149
           + YN  +  KK +     +  I +P   Y+G  +   PRP+
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL---PRPM 134


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 27  WGYNMKDAEKKRFRFFFVLRHINLPTQKYFGVIIKKVPRPL 149
           + YN  +  KK +     +  I +P   Y+G  +   PRP+
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL---PRPM 134


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 520 HQGVLHRTVRTHHPAQTHLPRKSCPVAMTTNLRS 419
           H G LHR +R H   + H     C V   T ++S
Sbjct: 159 HSGKLHRHMRIHTGERPH----KCTVCSKTFIQS 188


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 VSRIGG**SSPRDTTSLAGGSEQDGVFELCGVTPL 516
           +++ GG   + R   S+AGG+ +    ++ G TPL
Sbjct: 67  INQYGGEQPTLRLLCSIAGGTSESQWEDVTGSTPL 101


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 487 HHPAQTHLPRKSCP 446
           HHP+Q H  R S P
Sbjct: 321 HHPSQYHPHRGSSP 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,145
Number of Sequences: 438
Number of extensions: 3562
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)