Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C08
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    27   0.71 
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         25   2.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.0  

>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 178 IHSRSNCS*VVRSPSEALGQLLANPTPP 95
           + S  +C+  ++ P E LGQ +AN  PP
Sbjct: 34  LQSVHDCTEYLQIPKERLGQYMANEFPP 61


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 27  RNYWWPKGLSSFTRTGGRAKAQPGGVGFA--NSCPSASEG 140
           RN+  P  L++   +GG      G +GFA  N+ P  S+G
Sbjct: 131 RNFVAPAPLTNVQYSGGTFAFCRGAIGFALFNAGPETSDG 170


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 40  GPKAFPVSPGQVGEQRLSQEGWDL 111
           G K F   PG++GE+ L  E  D+
Sbjct: 421 GEKGFKGEPGRIGERGLMGEKGDM 444


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,711
Number of Sequences: 2352
Number of extensions: 4531
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)