Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_C07
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    32   2.0  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                32   2.0  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    31   6.2  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    31   6.2  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    31   6.2  

>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = +2

Query: 644 SAXPGWAXSXXPXPXPPP--XXPXSXXXXGXFFPXXXXPPLXPRXPP 778
           S+ PG+A    P P PPP    P      G   P    PP  P  PP
Sbjct: 439 SSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPP 485


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = +2

Query: 644 SAXPGWAXSXXPXPXPPP--XXPXSXXXXGXFFPXXXXPPLXPRXPP 778
           S+ PG+A    P P PPP    P      G   P    PP  P  PP
Sbjct: 310 SSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPP 356


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 PGWAXSXXPXPXPPP--XXPXSXXXXGXFFPXXXXPPLXPRXPP 778
           PG+A    P P PPP    P      G   P    PP  P  PP
Sbjct: 314 PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 PGWAXSXXPXPXPPP--XXPXSXXXXGXFFPXXXXPPLXPRXPP 778
           PG+A    P P PPP    P      G   P    PP  P  PP
Sbjct: 314 PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 PGWAXSXXPXPXPPP--XXPXSXXXXGXFFPXXXXPPLXPRXPP 778
           PG+A    P P PPP    P      G   P    PP  P  PP
Sbjct: 314 PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,332,468
Number of Sequences: 237096
Number of extensions: 805978
Number of successful extensions: 7736
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6340
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)