Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_B23
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.055
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.055
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.055
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 2.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 421 PPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPX 600
PP GG GG P PP G PPP GG PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 601 XXXXXXPP 624
PP
Sbjct: 767 GCPPPPPP 774
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPP 597
PPP GG G P G P GG PPP GG PPPPP
Sbjct: 729 PPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 777
Query: 598 XXXXXXXPP 624
PP
Sbjct: 778 GGFKGGPPP 786
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXGXXPPXXXXXKXXFFXPPPXGG 420
PP GG P GG P G PP PPP GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 421 PPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPX 600
PP GG GG P PP G PPP GG PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 601 XXXXXXPP 624
PP
Sbjct: 767 GCPPPPPP 774
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPP 597
PPP GG G P G P GG PPP GG PPPPP
Sbjct: 729 PPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 777
Query: 598 XXXXXXXPP 624
PP
Sbjct: 778 GGFKGGPPP 786
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXGXXPPXXXXXKXXFFXPPPXGG 420
PP GG P GG P G PP PPP GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 421 PPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPX 600
PP GG GG P PP G PPP GG PPPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 601 XXXXXXPP 624
PP
Sbjct: 350 GCPPPPPP 357
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPP 597
PPP GG G P G P GG PPP GG PPPPP
Sbjct: 312 PPPPGG------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 360
Query: 598 XXXXXXXPP 624
PP
Sbjct: 361 GGFKGGPPP 369
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXGXXPPXXXXXKXXFFXPPPXGG 420
PP GG P GG P G PP PPP GG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 350
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +1
Query: 412 KXPPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP 591
K PP G G P G PP G PPP G + PPP
Sbjct: 244 KGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Query: 592 PP 597
PP
Sbjct: 302 PP 303
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP-- 591
PPP G G P G PP G PPP G PP
Sbjct: 256 PPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 592 -PPXXXXXXXPP 624
PP PP
Sbjct: 312 LPPPQAGGSPPP 323
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXG--XXPPXXXXXKXXFFXPPPXGGG 417
PP G PP GG P G PP PPP GG
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 472 GGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPXXXXXXXPP 624
G P G PP G PPP R + ++ PP PP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +1
Query: 412 KXPPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP 591
K PP G G P G PP G PPP G + PPP
Sbjct: 265 KGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Query: 592 PP 597
PP
Sbjct: 323 PP 324
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP-- 591
PPP G G P G PP G PPP G PP
Sbjct: 277 PPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 592 -PPXXXXXXXPP 624
PP PP
Sbjct: 333 LPPPQAGGSPPP 344
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXG--XXPPXXXXXKXXFFXPPPXGGG 417
PP G PP GG P G PP PPP GG
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 472 GGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPXXXXXXXPP 624
G P G PP G PPP R + ++ PP PP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +1
Query: 412 KXPPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP 591
K PP G G P G PP G PPP G + PPP
Sbjct: 250 KGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Query: 592 PP 597
PP
Sbjct: 308 PP 309
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Frame = +1
Query: 418 PPPXGGGXKKXFFXXXXXGGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPP-- 591
PPP G G P G PP G PPP G PP
Sbjct: 262 PPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 592 -PPXXXXXXXPP 624
PP PP
Sbjct: 318 LPPPQAGGSPPP 329
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = -2
Query: 551 PPRXXGGGXXPPXGGXXXPXXXG--XXPPXXXXXKXXFFXPPPXGGG 417
PP G PP GG P G PP PPP GG
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 472 GGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPPXXXXXXXPP 624
G P G PP G PPP R + ++ PP PP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 484 PXXXGXXXPPX---GGXXPPPXXRGGXKKKKKKXXXPPPPP 597
P G PP GG PPP GG PPPPP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +1
Query: 421 PPXGGGXKKXFFXXXXX-GGXXPXXXGXXXPPXGGXXPPPXXRGGXKKKKKKXXXPPPPP 597
PP K FF G P G P G PPP GG PPPP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPG----PGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Query: 598 XXXXXXXPP 624
PP
Sbjct: 109 PMFGAPPPP 117
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.1 bits (57), Expect(2) = 2.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 508 PPXGGXXPPPXXRGGXKKKKKKXXXPPPPP 597
PP PPP G PPPPP
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Score = 21.0 bits (42), Expect(2) = 2.4
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 583 PPPPPXXXXXXXPP 624
PPPPP PP
Sbjct: 578 PPPPPPPMLGGPPP 591
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 541 GGGGGXXPPXGGXXXPXFXGXPPXXXXXKKXXFFXPPPXGG 419
G GG PP GG P G P F PPP GG
Sbjct: 405 GPGGYGPPPPGGPGAPGSYGPPQGGPGG-----FGPPPPGG 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,390,714
Number of Sequences: 27780
Number of extensions: 201337
Number of successful extensions: 1066
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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