Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_B22
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     31   1.0  
09_02_0603 - 11150739-11150746,11150791-11151340                       26   2.4  
09_04_0206 + 15607490-15607933                                         29   5.4  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   7.2  
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572...    28   9.5  

>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 514 GKKKXXXXXFFFFFFXXXXXXFFFFF 591
           G K+     FFFFFF      FFFFF
Sbjct: 57  GSKEDFFFFFFFFFFFFFFFFFFFFF 82



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +1

Query: 511 GGKKKXXXXXFFFFFFXXXXXXFFFFF 591
           G K+      FFFFFF      FFFFF
Sbjct: 57  GSKEDFFFFFFFFFFFFFFFFFFFFFF 83



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 68  FFFFFFFFFFFFFFFFF 84



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 69  FFFFFFFFFFFFFFFFF 85



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 70  FFFFFFFFFFFFFFFFF 86


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 25.8 bits (54), Expect(2) = 2.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 515 PPPPPXXXFFXXXGXXKKXHPPXFLG 438
           PPPPP   FF      +   PP  LG
Sbjct: 62  PPPPPLGSFFVPPPQSRVPPPPPQLG 87



 Score = 22.6 bits (46), Expect(2) = 2.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 527 FFFXPPPPPXXXF 489
           F F PPPPP   F
Sbjct: 41  FGFPPPPPPGSTF 53


>09_04_0206 + 15607490-15607933
          Length = 147

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -3

Query: 515 PPPPPXXXFFXXXGXXKKXHPPXFLGG 435
           PPPPP   FF      +K H    LGG
Sbjct: 23  PPPPPFVGFFFCMYCDRKFHSSQALGG 49


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFF 103



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 88  FFFFFFFFFFFFFFFFF 104



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 89  FFFFFFFFFFFFFFFFF 105



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 90  FFFFFFFFFFFFFFFFF 106



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 91  FFFFFFFFFFFFFFFFF 107



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 541 FFFFFFXXXXXXFFFFF 591
           FFFFFF      FFFFF
Sbjct: 92  FFFFFFFFFFFFFFFFF 108


>04_04_0201 -
           23555336-23556008,23556097-23556258,23556353-23557206,
           23557452-23557613,23558197-23558649,23559729-23559788,
           23559983-23560058,23561546-23561593,23561948-23562022,
           23562067-23562494
          Length = 996

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = +1

Query: 424 PPXXPPKXXGGCX-FXXXPXXXKKXXXGGGGG 516
           PP  PP    GC      P   +K   GGGGG
Sbjct: 289 PPPTPPPPEDGCSPLPLTPQFGQKFGSGGGGG 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,934,461
Number of Sequences: 37544
Number of extensions: 362058
Number of successful extensions: 10290
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7474
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)