Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_B17
         (1221 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,...    23   4.4  
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro...    23   4.5  
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,...    23   4.5  

>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
           isoform D protein.
          Length = 1207

 Score = 22.6 bits (46), Expect(3) = 4.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 801 PXPPPPXXXGGGXG 760
           P PPPP    GG G
Sbjct: 682 PPPPPPAPIEGGGG 695



 Score = 22.2 bits (45), Expect(3) = 4.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 948 FXXPPPXPPP 919
           F  PPP PPP
Sbjct: 645 FVAPPPPPPP 654



 Score = 22.2 bits (45), Expect(3) = 4.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 939 PPPXPPPXXGG 907
           PPP PPP   G
Sbjct: 669 PPPPPPPPGSG 679


>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
           protein.
          Length = 1049

 Score = 22.6 bits (46), Expect(3) = 4.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 801 PXPPPPXXXGGGXG 760
           P PPPP    GG G
Sbjct: 524 PPPPPPAPIEGGGG 537



 Score = 22.2 bits (45), Expect(3) = 4.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 948 FXXPPPXPPP 919
           F  PPP PPP
Sbjct: 487 FVAPPPPPPP 496



 Score = 22.2 bits (45), Expect(3) = 4.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 939 PPPXPPPXXGG 907
           PPP PPP   G
Sbjct: 511 PPPPPPPPGSG 521


>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
           isoform B protein.
          Length = 1049

 Score = 22.6 bits (46), Expect(3) = 4.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 801 PXPPPPXXXGGGXG 760
           P PPPP    GG G
Sbjct: 524 PPPPPPAPIEGGGG 537



 Score = 22.2 bits (45), Expect(3) = 4.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 948 FXXPPPXPPP 919
           F  PPP PPP
Sbjct: 487 FVAPPPPPPP 496



 Score = 22.2 bits (45), Expect(3) = 4.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 939 PPPXPPPXXGG 907
           PPP PPP   G
Sbjct: 511 PPPPPPPPGSG 521


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,772,117
Number of Sequences: 53049
Number of extensions: 428977
Number of successful extensions: 4552
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3788
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6499020495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)