Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_B11
(1087 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.088
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.9
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.8
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 35.1 bits (77), Expect = 0.088
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP +K GG PPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPP 141
Score = 34.3 bits (75), Expect = 0.15
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP K GG PPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPP 142
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP + GG PPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G G PPPP
Sbjct: 349 PPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP + GG PPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G G PPPP
Sbjct: 359 PPPPPRYPSAGPGMYPPPP 377
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 488 PPPPPMPSINGHAPNPPPP 506
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPP 595
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP + G PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPP 581
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPP 594
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPP 57
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPPXL 613
PPPPP GG PPPP +
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGM 792
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPPXL 613
PPPPP GG PPPP +
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGM 792
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPP 314
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP GG PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPPXL 613
PPPPP GG PPPP +
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGM 375
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PPPPPXKKXXGGGXXPPPP 607
PPPPP G PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,046,293
Number of Sequences: 27780
Number of extensions: 132246
Number of successful extensions: 914
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2918964402
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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