Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_B09
(971 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.6
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 6.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 6.6
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 574 GGPPPPPPP 582
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 714 GGPPPPPP 737
GGPPPPPP
Sbjct: 549 GGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 720 PPPPPPP 740
PPPPPPP
Sbjct: 578 PPPPPPP 584
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 740 GGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 756 GGPPPPPPP 764
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 782 GGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 740 GGPPPPPPP 748
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 756 GGPPPPPPP 764
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 782 GGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 307 GGPPPPPPP 315
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 323 GGPPPPPPP 331
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 339 GGPPPPPPP 347
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 365 GGPPPPPPP 373
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 587 GGPPPPPPP 595
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 1010 GGPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 714 GGPPPPPPP 740
GGPPPPPPP
Sbjct: 249 GGPPPPPPP 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,724,384
Number of Sequences: 27780
Number of extensions: 78002
Number of successful extensions: 3205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2178
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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