Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_B04
         (976 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037223-1|AAH37223.1|  194|Homo sapiens mediator complex subuni...    35   0.39 
BC009723-1|AAH09723.1|  205|Homo sapiens Unknown (protein for IM...    35   0.39 

>BC037223-1|AAH37223.1|  194|Homo sapiens mediator complex subunit
           19 protein.
          Length = 194

 Score = 35.1 bits (77), Expect = 0.39
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
           PPPPP    F  G PPPP         G APP
Sbjct: 14  PPPPPTALGFGPGKPPPPPPPPAGGGPGTAPP 45


>BC009723-1|AAH09723.1|  205|Homo sapiens Unknown (protein for
           IMAGE:3895048) protein.
          Length = 205

 Score = 35.1 bits (77), Expect = 0.39
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
           PPPPP    F  G PPPP         G APP
Sbjct: 14  PPPPPTALGFGPGKPPPPPPPPAGGGPGTAPP 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,824,632
Number of Sequences: 237096
Number of extensions: 1755957
Number of successful extensions: 5901
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3925
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)