Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_B04
(976 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 34 0.18
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 34 0.18
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.71
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP G PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP GG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP-----GGCPP 770
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G G PPPP GG PP
Sbjct: 760 PPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 475 PPPPXXXXXFKXGXPPPP 422
PPPP FK G PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPP 423
PPPPP G GGPPPP
Sbjct: 772 PPPPPPGGF--KGGPPPP 787
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 761 PPPPPGGCP-----PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPP 745
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP G PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP GG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP-----GGCPP 770
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G G PPPP GG PP
Sbjct: 760 PPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 475 PPPPXXXXXFKXGXPPPP 422
PPPP FK G PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPP 423
PPPPP G GGPPPP
Sbjct: 772 PPPPPPGGF--KGGPPPP 787
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 761 PPPPPGGCP-----PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPP 745
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP G PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G GGPPPP GG PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPP-----GGCPP 353
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G G PPPP GG PP
Sbjct: 343 PPPPPPG-----GCPPPPPPPPPGGFKGGPPP 369
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 475 PPPPXXXXXFKXGXPPPP 422
PPPP FK G PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPP 371
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPP 423
PPPPP G GGPPPP
Sbjct: 355 PPPPPPGGF--KGGPPPP 370
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP GG PP
Sbjct: 344 PPPPPGGCP-----PPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 310 PPPPPPGGLPPITGGPPPP 328
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G G PPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPP 344
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G + GGPPPP + GG PP
Sbjct: 680 PPPPPQGQQY-YGGPPPP--GQPYGPPGGYPP 708
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G + GGPPPP + GG PP
Sbjct: 680 PPPPPQGQQY-YGGPPPP--GQPYGPPGGYPP 708
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G + G PPPP G PP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 365
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G + G PPPP G PP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 375
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPP G GGPPPP ++ GGG PP
Sbjct: 783 PPPSFRGGRGGHGGPPPPHFDRR---GGGGPP 811
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 382 GGAPPPXXXFFXXXGGGGPPF 444
GG PPP F GGGGPPF
Sbjct: 795 GGPPPPH---FDRRGGGGPPF 812
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 475 PPPPXXXXXFKXGXPPPP 422
PPPP F G PPPP
Sbjct: 742 PPPPMFQQGFNAGAPPPP 759
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G + G PPPP
Sbjct: 634 PPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G + G PPPP
Sbjct: 460 PPPPPMGLPAVGAGAPPPP 478
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPP 423
PPPPP G GGPPPP
Sbjct: 539 PPPPPVGMA--NGGPPPP 554
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPP G G+PP
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPP G G+PP
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPP G G+PP
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPP GG PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 476 PPPPPXGXXF*XGGPPPPXXXKKXXXGGGAPP 381
PPPPP G PPPP G PP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 477 PPPPPXGXXFLKXGXPPPP 421
PPPPP G + PPPP
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,828,761
Number of Sequences: 27780
Number of extensions: 218285
Number of successful extensions: 985
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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