Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_B02
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 57 1e-08
03_06_0212 + 32400982-32402055 31 1.2
04_04_0612 + 26611743-26611878,26612211-26612340,26613243-26613798 30 1.6
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 30 2.2
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 29 2.9
06_03_0077 + 16284106-16284128,16284552-16284795,16285490-162855... 28 6.6
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 28 6.6
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 28 6.6
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 28 6.6
12_02_1239 - 27275110-27275445 28 8.8
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 8.8
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893... 28 8.8
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = -3
Query: 378 ELGQKKKTKRKRNSXLPPNADLSKP---PDPERWLPKYERTAYRKRRGIRRDVIKGSQG 211
E+ ++K KRKR P D + P PDPERWLPK ER++YR +R +R ++G+QG
Sbjct: 567 EVKKQKAKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAQVRGAQG 625
>03_06_0212 + 32400982-32402055
Length = 357
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 404 NNLPXLPAXSWDRRRKRNASATAXSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSS 225
+ LP L ++ A A RR+Q K GC STSE SD+ + V S+
Sbjct: 108 DTLPSLDPAAFAAIPHAAADAAPTRRRSQQQQQQLSNKSGCSSTSETSKGSDKEVTVASA 167
>04_04_0612 + 26611743-26611878,26612211-26612340,26613243-26613798
Length = 273
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 160 AYPGDLCQESPGRSQADRERLAAQATAEEERQG 62
A P D+ SP RS+ +ER+AA A E G
Sbjct: 128 AEPADVVTGSPNRSETGQERVAADRPASSESSG 160
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 489 RKSIXTPLESSKWMMGAEVVKKTVQSKQEQSPGTPGXE-LGQKKKTKRKRNSXLPPNADL 313
+KS LE++ K T QS + +S E + ++K T+ + + LPP L
Sbjct: 371 KKSRGAKLENNSLEKAQHKSKSTKQSTKSKSSSNGSNEKISKEKATETIQYTELPPPPPL 430
Query: 312 SKPPDP 295
PP P
Sbjct: 431 PPPPPP 436
>02_05_0101 -
25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/100 (26%), Positives = 33/100 (33%)
Frame = -1
Query: 491 DENRYXRPWNRRNG*WELKSSRRLFKASRNNLPXLPAXSWDRRRKRNASATAXSRRTQTS 312
DE R+ W RR W +R + + SW RRR R SRR +
Sbjct: 93 DERRHSWRWRRRP--WRRGGARGRAEVV---VAGKRRRSWRRRRSRTRQRRRRSRRRRRR 147
Query: 311 PNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPLPR 192
GGC + R E V V P+ R
Sbjct: 148 RRTCGGGGGCGRGGDARGRPTELAKVVDGAVTPSLVPVDR 187
>06_03_0077 +
16284106-16284128,16284552-16284795,16285490-16285591,
16286347-16287057
Length = 359
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 463 FQGRXYRFSSRAGPRGGXCSAXLRARGGSXAXXPXTXPXXLPXXP 597
F+ R R SR GP+ +A + +GG+ A LP P
Sbjct: 222 FEERVLRIKSRVGPKKRGSAAARKRKGGAGASSKSKAAVTLPPVP 266
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -3
Query: 417 QSKQEQSPGTPGXELGQKKKTKRKRNSXLPPNADLSKPPDPERWLPKYERTAYRKR 250
+ +Q+Q P + G KK K + +P A K P P + +PK E A KR
Sbjct: 15 REEQQQPPCHEARKAGGGKKAGAKEVAIVPEAAK--KAPPPRKAVPKAEEPAADKR 68
>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 404 NNLPXLPAXSWDRRRKRNASATAXSRRTQTSPN 306
+ +P PA + RRR ++S++ SRRT SP+
Sbjct: 1132 DQMPLPPAPAQIRRRASSSSSSLASRRTVASPS 1164
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 378 ELGQKKKTKRKRNSXLPPNADLSKPPDPERWLPKYERTA 262
EL ++ K+ KR S PP S PP P R P TA
Sbjct: 253 ELFKEAKSSSKRFSTPPPRRKPSSPPAPSRSPPHVFATA 291
>12_02_1239 - 27275110-27275445
Length = 111
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 563 GXXAXDPPRARXXAEQXPPLGPARDENRYXRPW 465
G A PPR Q P+ PA DE + PW
Sbjct: 60 GAPAPPPPRQPVAPAQPVPVRPAVDEAQLYAPW 92
>03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 27.9 bits (59), Expect = 8.8
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = -3
Query: 501 TSSRRKSIXTPLESSKWMMGAEVVKKTVQSKQEQSPGTPGXELGQKKKTKRKRNSXLPPN 322
TS RR I T + W ++ V + +S PG L +K+K + S L
Sbjct: 992 TSGRR--IVTDVRDVMWKSNSKTVGLRSTRNKRESSNFPGTHLLEKRKQVSMKYSWLM-- 1047
Query: 321 ADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQ 214
L + D R++P+ R+G + +KGS+
Sbjct: 1048 --LLEHEDSYRYIPQLGDEVMYLRQG-HEEYLKGSR 1080
>03_02_0502 -
8934646-8934834,8934974-8935121,8935228-8935304,
8935427-8935497,8935594-8935680,8935852-8936316,
8936406-8936880
Length = 503
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 306 PPDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTT 199
PP P +++P E +A+ K + DV+ ++ + TT
Sbjct: 25 PPTPPQYVPPEEPSAFAKLYAVAGDVVGRAKALLTT 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,289,060
Number of Sequences: 37544
Number of extensions: 273279
Number of successful extensions: 1020
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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