Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_B02
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    70   1e-12
U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical pr...    31   0.84 
U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    30   1.9  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z83316-8|CAB54186.1|  409|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light c...    28   7.8  
L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin l...    28   7.8  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = -3

Query: 468 LESSKWMMGAEVVKKTVQSKQEQSPGTPGXELGQKKK--TKRKRNSXLPPNADLSKPPDP 295
           LE S W++  E   K  Q K+ +SP T      +K K  TKRKR   LP N + +  PDP
Sbjct: 561 LEDSDWILYGE---KYRQKKEAKSPQTAEIAATRKLKIATKRKRKIRLPKNYNSAVTPDP 617

Query: 294 ERWLPKYERTAY-RKRRGIRRDVIKGSQGMST 202
           ERWLP+ ER+ Y RKR+   R++ +G+QG S+
Sbjct: 618 ERWLPRQERSTYKRKRKNREREIGRGTQGSSS 649


>U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical
           protein C13F10.7 protein.
          Length = 222

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = -3

Query: 501 TSSRRKSIXTPLES-SKWMMGAEVVKKTVQSKQEQSPGTPGXELGQKKKTKRKRNSXLPP 325
           TSS      TPL +  K     + +KK  + +++++      E  +++K KR+R      
Sbjct: 111 TSSESSDDETPLIALEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKRRRRDDSDD 170

Query: 324 NADLSKPPDPERWLPKYERTAYRKRR 247
           ++D  +  D +R   K  +   RKRR
Sbjct: 171 SSDSDEEEDRKRKKSKESKKEKRKRR 196


>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 378 ELGQKKKTKRKRNSXLPPNADLSKPPDP 295
           E G KKK KRK+ +  PP  +  +PP P
Sbjct: 398 ENGYKKKQKRKKINCPPPQREHYQPPQP 425


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 378 ELGQKKKTKRKRNSXLPPNADLSKPPDP 295
           E G KKK KRK+ +  PP  +  +PP P
Sbjct: 449 ENGYKKKQKRKKINCPPPQREHYQPPQP 476


>Z83316-8|CAB54186.1|  409|Caenorhabditis elegans Hypothetical
           protein B0379.7 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -1

Query: 443 ELKSSRRLFKASRNNLPXLPAXSWDRRRKRNASATAXSRRTQTSPNLPIRKGGCQSTSEL 264
           E K S+++ K  +N        S  R+ K+N  +   S  T   P     + G Q+ +EL
Sbjct: 211 ESKKSKKI-KKKKNKKSKDKKKSNSRKNKKNKKSKGKSTSTSEPPTPNQPETGVQTANEL 269

Query: 263 RTESDEA 243
           R ++ E+
Sbjct: 270 RNDAPES 276


>U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light
           chain protein 3, isoforma protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 294 ERWLPKYERTAYRKRRGIRRDVIKG 220
           E WLP YE+ A  K +G   D  +G
Sbjct: 64  EEWLPMYEQLAKEKEQGTYADFYEG 88


>L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin
           light chain protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 294 ERWLPKYERTAYRKRRGIRRDVIKG 220
           E WLP YE+ A  K +G   D  +G
Sbjct: 64  EEWLPMYEQLAKEKEQGTYADFYEG 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,992,385
Number of Sequences: 27780
Number of extensions: 206004
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)