Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_T7_A19
         (1119 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    30   3.8  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   5.1  
09_02_0603 - 11150739-11150746,11150791-11151340                       29   8.8  

>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
            4683834-4684204,4684290-4684835,4684927-4685027,
            4685117-4685933,4686025-4686213,4686313-4686384,
            4686477-4686587,4686647-4686652,4686694-4686794,
            4687714-4687813,4687891-4687986,4688157-4688273,
            4688367-4688492,4688566-4688619,4688745-4688992,
            4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -1

Query: 1077 PPXXXPPPXKXPXXKXXPXKKXXPPXXKXPPXPK 976
            PP   PPP   P     P     PP    PP P+
Sbjct: 426  PPPPLPPPPPPPPPPPPPLPPNMPPPLPPPPEPE 459


>02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,
            3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -1

Query: 1077 PPXXXPPPXKXPXXKXXPXKKXXPPXXKXPPXPKKT 970
            PP   PPP   P     P KK  PP    P  PK T
Sbjct: 362  PPPPPPPPPPRPPPPPPPIKKGAPP----PAPPKAT 393


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 826 PPPPXXXFFFPPPXKKI 876
           PPPP   FF PPP  ++
Sbjct: 63  PPPPLGSFFVPPPQSRV 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,518,773
Number of Sequences: 37544
Number of extensions: 292539
Number of successful extensions: 1173
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3374709644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)