Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_A14
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 177 1e-45
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 44 3e-05
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 28 1.2
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 28 1.6
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 27 2.1
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 27 2.1
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 27 3.7
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 26 4.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 4.9
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 25 8.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 8.5
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 8.5
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 8.5
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 177 bits (432), Expect = 1e-45
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 676 FPEPLRSKVLKTCRESRTSR--KRXPFXNFDKXKGELKESFPDINDEDVMSAAMYPQVAS 503
FPEPLR+ VLK R+ T R K P +FD + L E F +D D+ + +P V
Sbjct: 963 FPEPLRTNVLKGRRQPLTDRPGKFLPAADFDAIRKLLSEKFGVSSDCDIAAYTQFPGVFE 1022
Query: 502 DFFRFRDKYGPVKHLDTKTFLVGPAVGDTIEVKIERGKTLDIRTVAVSEDMTAAGEREVF 323
++ +F D+YG + + TK FL P + + + V+I++GKTL ++ VA+ G+REV+
Sbjct: 1023 EYRQFVDRYGDLTTVPTKFFLSRPEMNEEMHVEIDQGKTLIVKFVALGPLNPRTGQREVY 1082
Query: 322 FELNGQLRSVFIRDENASKEMKIHPKAVKGDKNQVGAPMPGTVLTIKVKEGDKVEKGQPI 143
FELNG+ R V + D+ A+ E P+A G+ V APM GT++ I+VKEG KV+KG I
Sbjct: 1083 FELNGENRHVTVEDKKAAIETVTRPRADPGNPGHVAAPMSGTIVEIRVKEGAKVKKGDII 1142
Query: 142 AVLSAMKMEMIVQAPKAGTVKTVSITNGQKLEGDDLICTIE 20
AVLSAMKME+++ AP +G +K++++ G + G DL +E
Sbjct: 1143 AVLSAMKMEIVISAPHSGVLKSLAVVQGDSVNGGDLCAVLE 1183
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 43.6 bits (98), Expect = 3e-05
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = -3
Query: 316 LNGQLRSVFIRDENASKEMKIHPKAV----KGDKNQVGAPMPGTVLTIKVKEGDKVEKGQ 149
LNG +V+ RDE + I + + D Q+ P PG ++ V+ G+ ++ G+
Sbjct: 677 LNGHSYTVYYRDEVTGTRISIDNLSCMLEQENDPTQLRTPSPGKLVRFLVETGEHIKAGE 736
Query: 148 PIAVLSAMKMEMIVQAPKAGTVKTVSITNGQKLEGDDLI 32
A + MKM M + A + G V+ + G L+ D++
Sbjct: 737 AYAEVEVMKMIMPLVATEDGVVQLIK-QPGASLDAGDIL 774
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 375 LMSRVFPRSILTSMVSPTAGPTRKVLVSRCLTGPYLSRKRKKSL 506
L + V T + P PT+K ++R T P R R KSL
Sbjct: 52 LETNVSSHQSATKFIEPEPSPTKKTKLTRRDTRPLAERARPKSL 95
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 478 YGPVKHLDTKTFLVGPAVG 422
YGP KHLD K + G VG
Sbjct: 380 YGPAKHLDNKHTIFGRVVG 398
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +3
Query: 255 IFISLLAFSSLMKTDRSCPLSSKKTSRSPAAVMSSDTATVLMSRVFPRSILTSMVSP 425
+FI+ S D+ P+ K +R P VM T + + P + V P
Sbjct: 506 VFINQKFLDSFAIVDKLLPVLEKVKTREPTVVMGMVTVYISAGAIIPEETVHEQVIP 562
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 220 VGAPMPGTVLTIKVKEGDKVEKGQPIAVL--SAMKMEMIVQAPKAGTVKT 77
V AP G + VKEGD + Q IAV+ SA E PK VKT
Sbjct: 88 VTAPDAGVLKEQLVKEGDTITIDQDIAVIDTSAAPPEGGSAGPKKDEVKT 137
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 647 QNFRPQWFRESPYGIPMAPCRYS 715
Q R QW R+ P+G PC+ S
Sbjct: 10 QEERKQWRRDHPFGFYAKPCKSS 32
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 194 SHYQSEGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTRRRRFDLHYRIK 15
S+Y+ + R + +E D R + N+R S +Y DR +KR T + D H R K
Sbjct: 359 SNYRDDYRHRRKE--RDHRDDQSSFRNERFS--NYYGDDRSYHKRRNTGNKNCDDHLRDK 414
Query: 14 KKKK 3
++
Sbjct: 415 SPER 418
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 223 QVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVS 71
Q AP+ T TIK K P V SA + P A VS
Sbjct: 1039 QAAAPVTSTTTTIKQATTVSASKPAPSTVTSAASSPSNISKPSAPVANNVS 1089
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 638 ACFQNFRPQWFRESPYGIPMAPC 706
A F+N + +WF E + P PC
Sbjct: 88 ASFENVKEKWFPEVHHHCPGVPC 110
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 281 VSDED*PQLPVELEEDLALAGGRHVLRHRHRPDVQGLSA 397
V+ E + P+ LEED + G ++++ ++ PD+ L A
Sbjct: 18 VNKEQTYKKPIPLEEDDYIEGLSYIIQQQYFPDLPKLKA 56
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 677 IP*TIEVESFENMPRIEDVPEKXAFXELR*XKG*TERIFPRHKRRGRD 534
IP + + + P+ +D PE F E +G T + F H GR+
Sbjct: 781 IPFGFKYRTLPHFPKDDDSPESRGFIENSYLRGLTPQEFFFHAMAGRE 828
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 319 ELNGQLRSVFIRDENASKEMKIHPKAVKGDKNQVGAPMPGTVL 191
E GQ + + D N + + VK D NQ + T+L
Sbjct: 796 ESKGQSKKTLLHDSNMESLKSVISRIVKKDSNQSDDSVESTIL 838
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,661,144
Number of Sequences: 5004
Number of extensions: 49628
Number of successful extensions: 162
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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