Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_T7_A01
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 38 0.012
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.25
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.25
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 1.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.0
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 29 4.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 7.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 26/76 (34%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP +G P P P P+ P P P P P GG R P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPP 298
Query: 397 PXXXPRXNPPXXAKNP 350
P PR +PP + P
Sbjct: 299 PPPPPRGSPPTGSLPP 314
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/84 (21%), Positives = 23/84 (27%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP G + PP P P P P P G R P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
Query: 397 PXXXPRXNPPXXAKNPXKNPKXXP 326
P +PP + + P+ P
Sbjct: 341 ERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/114 (24%), Positives = 30/114 (26%), Gaps = 3/114 (2%)
Frame = -1
Query: 600 GXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXRXGGEXGK 421
G R + P P PP P P + PP P G
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 420 XAXXXXXPP---XXPPEXTPRXXPKTPXKTPXPXXX*RASSPTSLNTXDLTPXP 268
A PP PP PR P T P P SP T P P
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQ---AGGSPPPAGTGSPPPPP 333
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = -2
Query: 533 PXXPRXXXXPXXPQXXXPGDHPXXXXXXPPGXGXRXGXPRXXKXTPXXXPPXKPPXXXQK 354
P P P P+ P P PP G PR P P PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLP 313
Query: 353 PPKKPQXP 330
PP+ P
Sbjct: 314 PPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 26/76 (34%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP +G P P P P+ P P P P P GG R P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPP 319
Query: 397 PXXXPRXNPPXXAKNP 350
P PR +PP + P
Sbjct: 320 PPPPPRGSPPTGSLPP 335
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/84 (21%), Positives = 23/84 (27%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP G + PP P P P P P G R P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
Query: 397 PXXXPRXNPPXXAKNPXKNPKXXP 326
P +PP + + P+ P
Sbjct: 362 ERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/114 (24%), Positives = 30/114 (26%), Gaps = 3/114 (2%)
Frame = -1
Query: 600 GXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXRXGGEXGK 421
G R + P P PP P P + PP P G
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 420 XAXXXXXPP---XXPPEXTPRXXPKTPXKTPXPXXX*RASSPTSLNTXDLTPXP 268
A PP PP PR P T P P SP T P P
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQ---AGGSPPPAGTGSPPPPP 354
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = -2
Query: 533 PXXPRXXXXPXXPQXXXPGDHPXXXXXXPPGXGXRXGXPRXXKXTPXXXPPXKPPXXXQK 354
P P P P+ P P PP G PR P P PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLP 334
Query: 353 PPKKPQXP 330
PP+ P
Sbjct: 335 PPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 26/76 (34%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP +G P P P P+ P P P P P GG R P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPP 304
Query: 397 PXXXPRXNPPXXAKNP 350
P PR +PP + P
Sbjct: 305 PPPPPRGSPPTGSLPP 320
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/84 (21%), Positives = 23/84 (27%)
Frame = -3
Query: 577 PPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXP 398
PP G + PP P P P P P G R P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
Query: 397 PXXXPRXNPPXXAKNPXKNPKXXP 326
P +PP + + P+ P
Sbjct: 347 ERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/114 (24%), Positives = 30/114 (26%), Gaps = 3/114 (2%)
Frame = -1
Query: 600 GXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXRXGGEXGK 421
G R + P P PP P P + PP P G
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 420 XAXXXXXPP---XXPPEXTPRXXPKTPXKTPXPXXX*RASSPTSLNTXDLTPXP 268
A PP PP PR P T P P SP T P P
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQ---AGGSPPPAGTGSPPPPP 339
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = -2
Query: 533 PXXPRXXXXPXXPQXXXPGDHPXXXXXXPPGXGXRXGXPRXXKXTPXXXPPXKPPXXXQK 354
P P P P+ P P PP G PR P P PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLP 319
Query: 353 PPKKPQXP 330
PP+ P
Sbjct: 320 PPQAGGSP 327
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.012
Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 3/135 (2%)
Frame = -3
Query: 721 GGKLRXEKXXRXPPRXXXXXRXXXNPKXRXNXRKDPLXNPRXXTPQXXPPXXRGXTXPPX 542
GG L+ E + P + P+ + + DP P+ P + P
Sbjct: 148 GGVLKNEPKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP 207
Query: 541 XXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXRXXXXXPPXXXPRXNP--- 371
P P P+ P P+ P P P + + + P + P
Sbjct: 208 KPEP-KPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPK 266
Query: 370 PXXAKNPXKNPKXXP 326
P P NPK P
Sbjct: 267 PKLKPKPKPNPKPEP 281
Score = 35.5 bits (78), Expect = 0.047
Identities = 30/151 (19%), Positives = 41/151 (27%), Gaps = 1/151 (0%)
Frame = -3
Query: 775 KXEXSXKXPEXPRXXXXSGGKLRXEKXXRXPPRXXXXXRXXXNPKXRXNXRKDPLXNPRX 596
K E K P+ K + + + P+ PK + P P+
Sbjct: 172 KPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKP 231
Query: 595 XTPQXXPPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGGGXEXEXR 416
P + P P PK P P+ P P P E +
Sbjct: 232 KPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPK---PKLKPKPKPNPKPEPNPMPELK 288
Query: 415 XXXXXPPXXXPRXNP-PXXAKNPXKNPKXXP 326
P P+ NP P NPK P
Sbjct: 289 PKPKHKPNSRPKPNPRPKPKPRSKPNPKPKP 319
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.25
Identities = 29/120 (24%), Positives = 32/120 (26%)
Frame = -1
Query: 627 PEKIPXKTPGXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXP 448
P +P TPG P P P PP P P P PP P
Sbjct: 274 PPPMPP-TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-----PPPPSRFGP 327
Query: 447 XRXGGEXGKXAXXXXXPPXXPPEXTPRXXPKTPXKTPXPXXX*RASSPTSLNTXDLTPXP 268
GG P PP PR P P P + P+ P P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = -1
Query: 618 IPXKTPGXRP-PXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXR 442
+P P P P P P PP P + P P T GPP P
Sbjct: 263 VPPPPPSVTPMPPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 441 XGGEXGKXAXXXXXPPXXPPEXTPRXXPKTP 349
G PP P P P P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.25
Identities = 29/120 (24%), Positives = 32/120 (26%)
Frame = -1
Query: 627 PEKIPXKTPGXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXP 448
P +P TPG P P P PP P P P PP P
Sbjct: 284 PPPMPP-TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP-----PPPPSRFGP 337
Query: 447 XRXGGEXGKXAXXXXXPPXXPPEXTPRXXPKTPXKTPXPXXX*RASSPTSLNTXDLTPXP 268
GG P PP PR P P P + P+ P P
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = -1
Query: 618 IPXKTPGXRP-PXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXR 442
+P P P P P P PP P + P P T GPP P
Sbjct: 273 VPPPPPSVTPMPPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 441 XGGEXGKXAXXXXXPPXXPPEXTPRXXPKTP 349
G PP P P P P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Frame = -2
Query: 548 PPXXXPXXPRXXXXPXXPQXXXPGD-HPXXXXXXPPGXGXRXGXPRXXKXTPXXXPPXKP 372
PP P P P P P D PPG G P P P +P
Sbjct: 209 PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
Query: 371 PXXXQKPPKKP 339
P P ++P
Sbjct: 269 PGPPGPPTRRP 279
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/53 (26%), Positives = 18/53 (33%)
Frame = -1
Query: 627 PEKIPXKTPGXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPP 469
P +IP +P +P P PP P P P + GPP
Sbjct: 470 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGPP 522
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/96 (26%), Positives = 27/96 (28%)
Frame = -1
Query: 618 IPXKTPGXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXRX 439
+ KTP P P P P + P TPK P P
Sbjct: 431 VEPKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTT--PPTTPKPAPPPPSRIPNPSPSPQ 488
Query: 438 GGEXGKXAXXXXXPPXXPPEXTPRXXPKTPXKTPXP 331
E K PP PP TP P P P P
Sbjct: 489 PAEVSKSPPP---PPPLPPIATPSSVPPPPPPPPPP 521
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/83 (28%), Positives = 27/83 (32%)
Frame = -1
Query: 555 PXPPXXXPXXAPXXXXPXXTPKXXTRGPPXXXXXXPXRXGGEXGKXAXXXXXPPXXPPEX 376
P PP A P P R PP P R PP PP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP-PRRP---PMTPPSPQRRPPRTPPSP 178
Query: 375 TPRXXPKTPXKTPXPXXX*RASS 307
PR P+TP +P P R +S
Sbjct: 179 EPRNPPRTP-PSPIPPPPPRLNS 200
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/81 (25%), Positives = 25/81 (30%)
Frame = -1
Query: 684 PPXXXRXHXXRXTQXLXXTPEKIPXKTPGXRPPXKXPRXXXEXPXPPXXXPXXAPXXXXP 505
PP R + P ++P P PP PR P P P P P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP---PRRPPMTPPSPQRRPPRTP----P 176
Query: 504 XXTPKXXTRGPPXXXXXXPXR 442
P+ R PP P R
Sbjct: 177 SPEPRNPPRTPPSPIPPPPPR 197
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -2
Query: 449 PPGXGXRXGXPRXXKXTPXXXPPXKPPXXXQKPPKKPQXP 330
PP R + P PP PP ++PP+ P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -3
Query: 649 NPKXRXNXRKDPLXNPRXXTPQXXPPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTT 470
NP +PL P PP G P P P PE P PG
Sbjct: 120 NPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPN-GEPGNK 178
Query: 469 PRXXPXPXPGG 437
P P PGG
Sbjct: 179 GPAGP-PGPGG 188
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 399 PPXXPPEXTPRXXPKTPXKTP 337
PP PP+ TPR TP K P
Sbjct: 300 PPKSPPKSTPRTSKSTPPKRP 320
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/69 (23%), Positives = 19/69 (27%)
Frame = -2
Query: 506 PXXPQXXXPGDHPXXXXXXPPGXGXRXGXPRXXKXTPXXXPPXKPPXXXQKPPKKPQXPX 327
P P P H PP + P PP PP PP P P
Sbjct: 95 PAPPPAPYP-QHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Query: 326 XDKEHHLQH 300
++ H
Sbjct: 154 APHSAYIDH 162
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 604 PRXXTPQXXPPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGG 437
P P P G PP P P P PG P P P PGG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 604 PRXXTPQXXPPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGG 437
P P P G PP P P P PG P P P PGG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 604 PRXXTPQXXPPXXRGXTXPPXXXXPXXPXXXXXPEXPKXXXPGTTPRXXPXPXPGG 437
P P P G PP P P P PG P P P PGG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPPGG 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,756,977
Number of Sequences: 27780
Number of extensions: 168502
Number of successful extensions: 758
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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