Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_P21
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0114 - 886404-887111                                             29   6.1  

>11_01_0114 - 886404-887111
          Length = 235

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +2

Query: 368 TPSSSTNGTETLVPEDNLYALMPPFETFLNVD----KTXRLXHFFDNVKTGELIIGAVIN 535
           T +++ NG+ +++P   + A  PPF T  + D    +  R            L++  V+ 
Sbjct: 5   TAAAAGNGSGSILPTHTIAATAPPFRTHKDADLESRRRRRRRRCLCCCLLVTLVVLLVLA 64

Query: 536 RTASXMMLKVLCTAGPTSRYV 598
            T   + L VL    PT+R V
Sbjct: 65  ITLLVLFLTVLRVRDPTTRLV 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,652,041
Number of Sequences: 37544
Number of extensions: 331668
Number of successful extensions: 577
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)