Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P21
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repea... 66 1e-10
AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein. 66 1e-10
AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein pr... 66 1e-10
AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein. 66 1e-10
AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens ... 66 1e-10
>BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repeat
domain 14 protein.
Length = 770
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 128 LDASLVAQSINYHGQQLQKTWESXRGEDDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 301
+D L+ QS+N HG L S + ++ + +G+ +H + KR
Sbjct: 1 MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60
Query: 302 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLYALMPPFETFLNVDKTXRL 478
+++ +FI K+A LF S D P++S ++ ED+ YA+MPP E F+ + R
Sbjct: 61 NIEIQKFISKKADLLFALSWKSDAPATSEINEDS---EDH-YAIMPPLEQFMEIPSMDRR 116
Query: 479 XHFFDNVKTGELIIGAVINRTASXMMLKVLCTAGPTSRYVXDINVKAFLPVXNI 640
FF +++ G+++IG + + + ++C R + + + A P+ ++
Sbjct: 117 ELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 170
>AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein.
Length = 653
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 128 LDASLVAQSINYHGQQLQKTWESXRGEDDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 301
+D L+ QS+N HG L S + ++ + +G+ +H + KR
Sbjct: 1 MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60
Query: 302 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLYALMPPFETFLNVDKTXRL 478
+++ +FI K+A LF S D P++S ++ ED+ YA+MPP E F+ + R
Sbjct: 61 NIEIQKFISKKADLLFALSWKSDAPATSEINEDS---EDH-YAIMPPLEQFMEIPSMDRR 116
Query: 479 XHFFDNVKTGELIIGAVINRTASXMMLKVLCTAGPTSRYVXDINVKAFLPVXNI 640
FF +++ G+++IG + + + ++C R + + + A P+ ++
Sbjct: 117 ELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 170
>AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein
protein.
Length = 462
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 128 LDASLVAQSINYHGQQLQKTWESXRGEDDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 301
+D L+ QS+N HG L S + ++ + +G+ +H + KR
Sbjct: 24 MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 83
Query: 302 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLYALMPPFETFLNVDKTXRL 478
+++ +FI K+A LF S D P++S ++ ED+ YA+MPP E F+ + R
Sbjct: 84 NIEIQKFISKKADLLFALSWKSDAPATSEINEDS---EDH-YAIMPPLEQFMEIPSMDRR 139
Query: 479 XHFFDNVKTGELIIGAVINRTASXMMLKVLCTAGPTSRYVXDINVKAFLPVXNI 640
FF +++ G+++IG + + + ++C R + + + A P+ ++
Sbjct: 140 ELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 193
>AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 128 LDASLVAQSINYHGQQLQKTWESXRGEDDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 301
+D L+ QS+N HG L S + ++ + +G+ +H + KR
Sbjct: 16 MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 75
Query: 302 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLYALMPPFETFLNVDKTXRL 478
+++ +FI K+A LF S D P++S ++ ED+ YA+MPP E F+ + R
Sbjct: 76 NIEIQKFISKKADLLFALSWKSDAPATSEINEDS---EDH-YAIMPPLEQFMEIPSMDRR 131
Query: 479 XHFFDNVKTGELIIGAVINRTASXMMLKVLCTAGPTSRYVXDINVKAFLPVXNI 640
FF +++ G+++IG + + + ++C R + + + A P+ ++
Sbjct: 132 ELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 185
>AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ31422 fis, clone NT2NE2000384, weakly similar to
MICRONUCLEAR LINKER HISTONE POLYPROTEIN. ).
Length = 770
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 128 LDASLVAQSINYHGQQLQKTWESXRGEDDLXKIGVGALDFAVYQSRHKHLTFQDRXKR-- 301
+D L+ QS+N HG L S + ++ + +G+ +H + KR
Sbjct: 1 MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVD 60
Query: 302 -LKLHQFIXKEAGALFDSSLLEDTPSSSTNGTETLVPEDNLYALMPPFETFLNVDKTXRL 478
+++ +FI K+A LF S D P++S ++ ED+ YA+MPP E F+ + R
Sbjct: 61 NIEIQKFISKKADLLFALSWKSDAPATSEINEDS---EDH-YAIMPPLEQFMEIPSMDRR 116
Query: 479 XHFFDNVKTGELIIGAVINRTASXMMLKVLCTAGPTSRYVXDINVKAFLPVXNI 640
FF +++ G+++IG + + + ++C R + + + A P+ ++
Sbjct: 117 ELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDV 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,670,437
Number of Sequences: 237096
Number of extensions: 1899964
Number of successful extensions: 6499
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6494
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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