Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_P21
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   1.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 356  LLEDTPSSSTNGTETLVPEDNLYALMPPFE-TF-LNVDKTXRLXHFFDNVKTGEL 514
            +L   P S   GT  ++P+DN    +P  E  F LNV+        ++ + T +L
Sbjct: 1047 ILNLRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVETAKTNEEMWELIDTEKL 1101


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 718 IPXTDKMVCGMKGV 759
           IP T + VCG+KG+
Sbjct: 534 IPGTQEHVCGVKGI 547


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 STNGTETLVPEDNLYALMPPFETFLNVDKTXR 475
           S    ET++  ++ Y L PP E   +  +T R
Sbjct: 109 SRQDIETIIRRNSRYPLRPPQEVISHYRRTRR 140


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 67  FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 168
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 229 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 262


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 67  FWKRNNITSCWEKKNLNGSFIGCVLSGAVHKLSW 168
           F + N++   W  +  N  F+G   S  V +LSW
Sbjct: 267 FDRMNSLGLSWLDQLTNLGFLGMKESVEVDQLSW 300


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 239 LDFAVYQSRHKHLTFQDRXKRLK 307
           LDF    S H+H  F+   +R+K
Sbjct: 118 LDFVPNHSSHEHPWFKKSVQRIK 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,270
Number of Sequences: 438
Number of extensions: 3592
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)