Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_P20
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical p...    29   5.6  
U20783-1|AAC46845.1|  535|Caenorhabditis elegans unknown protein.      29   5.6  
AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical ...    29   5.6  
AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = +3

Query: 123 NQRGKKTLLEL-----DSSSGIVRRHXRCXISGRSFRAIVAEKPL-LSLFHYLL 266
           N  GK TLL+L       + G++RRH  C I GR  + +  E PL LS   +++
Sbjct: 430 NGAGKSTLLKLLCTDVMPTDGLIRRHSHCKI-GRYHQHLHEELPLDLSALEFMM 482


>U20783-1|AAC46845.1|  535|Caenorhabditis elegans unknown protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = +3

Query: 123 NQRGKKTLLEL-----DSSSGIVRRHXRCXISGRSFRAIVAEKPL-LSLFHYLL 266
           N  GK TLL+L       + G++RRH  C I GR  + +  E PL LS   +++
Sbjct: 429 NGAGKSTLLKLLCTDVMPTDGLIRRHSHCKI-GRYHQHLHEELPLDLSALEFMM 481


>AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = +3

Query: 123 NQRGKKTLLEL-----DSSSGIVRRHXRCXISGRSFRAIVAEKPL-LSLFHYLL 266
           N  GK TLL+L       + G++RRH  C I GR  + +  E PL LS   +++
Sbjct: 430 NGAGKSTLLKLLCTDVMPTDGLIRRHSHCKI-GRYHQHLHEELPLDLSALEFMM 482


>AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical
           protein ZC190.4 protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/45 (28%), Positives = 28/45 (62%)
 Frame = -2

Query: 327 LGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLXY 193
           +GT+ +   DIID   +P N +S++ +  +++  R  ET++H+ +
Sbjct: 287 VGTR-KTSTDIIDGFNVPSNMISDDNLPALIY--RVIETLNHMIF 328


>Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical
           protein T08G3.7 protein.
          Length = 943

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
 Frame = +3

Query: 78  IYYLAKPQPRERAW------ENQRGKKTLLE 152
           +YY  KP   ER W      +NQ GK TLL+
Sbjct: 589 LYYFGKPLDYERRWRYSLFLDNQDGKNTLLD 619


>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
           protein F36D3.5 protein.
          Length = 1152

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
 Frame = +3

Query: 78  IYYLAKPQPRERAW------ENQRGKKTLLE 152
           +YY  KP   ER W      +NQ GK TLL+
Sbjct: 790 LYYFGKPLDYERRWRYSLFLDNQGGKNTLLD 820


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
           protein F26D2.10 protein.
          Length = 1213

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
 Frame = +3

Query: 78  IYYLAKPQPRERAW------ENQRGKKTLLE 152
           +YY  KP   ER W      +NQ GK TLL+
Sbjct: 851 LYYFGKPLDYERRWRYSLFLDNQDGKNTLLD 881


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,924,201
Number of Sequences: 27780
Number of extensions: 319744
Number of successful extensions: 754
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)