Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P17
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 40 0.003
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 38 0.007
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 38 0.007
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 36 0.026
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 32 0.57
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 31 1.00
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 1.00
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.00
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 1.7
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 3.4
AF125955-11|AAK71367.1| 178|Caenorhabditis elegans Hypothetical... 29 4.0
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 29 5.3
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 29 5.3
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 29 5.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 25 5.7
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.0
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.0
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 28 7.0
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 28 7.0
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 28 7.0
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 7.0
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 7.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 28 9.3
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 28 9.3
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 9.3
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 28 9.3
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 9.3
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 28 9.3
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 9.3
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 9.3
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 28 9.3
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 52.0 bits (119), Expect = 5e-07
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Frame = +3
Query: 186 APLSPRLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWF 359
A LSP LLF +Y+NDI +A FADDT +Y S K LQ+A + W
Sbjct: 81 AVLSP-LLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVVDWT 138
Query: 360 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPTVRPITMFDQPIPWAPKVK 539
+ ++ +N +K T+ + + RR++ + PI +
Sbjct: 139 KGSKLTLNQSK--------------TVHVTVGKRRIDF------KYHLDGYPIERKAITR 178
Query: 540 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMSLXNKVTLYKTCIRPVMTYA 719
LG + ++ F H + + A F L ++ T +K + + LYKT IRP + Y
Sbjct: 179 DLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYG 235
Query: 720 SVXFAHAXRTHLKSFQIIXSRFCR 791
+V + ++ K+ + + + F R
Sbjct: 236 TVVSSPTKKSDEKTIESVQNAFTR 259
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 35 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 202
H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T GVPQG+ LSP
Sbjct: 30 HDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP 85
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/132 (25%), Positives = 56/132 (42%)
Frame = +3
Query: 192 LSPRLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWR 371
+SP L F+ Y+ D+P +T L +ADD +I +K ++Q + ++ ++
Sbjct: 539 ISPNL-FTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERG 597
Query: 372 IDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLGV 551
+ I+ KST +F P P I D PIP K LG+
Sbjct: 598 MSISAEKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINAPKLLGI 641
Query: 552 TLDSRMTFRPHI 587
TL++ + H+
Sbjct: 642 TLNTMTGTKDHV 653
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 68 GVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTI*FVYQRYTPVSG 247
G+ ++ L + +YL R R + S+ + GVPQGS +SP F Y + P
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTF-YLKDMPTQQ 555
Query: 248 D 250
D
Sbjct: 556 D 556
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +3
Query: 513 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMSLXNKVTLYKT 692
PI + LG + ++ F H K + A F L ++ T +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 693 CIRPVMTYASVXFAHAXRTHLKSFQIIXSRFCR 791
IRP + Y +V + ++ K+ + + + F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 38.3 bits (85), Expect = 0.007
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Frame = +3
Query: 192 LSPRLLFSLYIND--IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRK 365
+S LLF L+IN+ I +P +++ FADD I+++ +Q + + W +
Sbjct: 886 VSGPLLFILFINNLLIDLAPTINISCFADDVKIFHTDPTI------IQNSIDIIVSWSKL 939
Query: 366 WRIDINPTKSTAVLFKRGRPPNTTLSIP-LPTRRVNTPAPTVRPITMFDQPIPWAPKVKY 542
+ + PTKS A+L R N + S+ +P TP+ TVR
Sbjct: 940 NELPLAPTKS-ALLALGTRNKNQSYSVDGVPI----TPSSTVRD---------------- 978
Query: 543 LGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMSLXNKVTLYKTCIRPVMTYAS 722
LG+ D ++ F HI V + + R ++ S S LYKT + P+M Y S
Sbjct: 979 LGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCS 1035
Query: 723 VXFA 734
+A
Sbjct: 1036 EVYA 1039
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 202
KL G+ +++L NR+F ++ S+ + +++GVPQGS P
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGP 889
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +3
Query: 513 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICTRSKMSLXNKVTLYKT 692
PI + + LG+ DS++TF+PHIK + + L R ++ + + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 693 CIRPVMTYASVXFA 734
I P++ Y S ++
Sbjct: 245 YILPLIEYGSAVYS 258
Score = 34.7 bits (76), Expect = 0.081
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 35 HNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 202
H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS P
Sbjct: 9 HSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGP 65
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.57
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 2/131 (1%)
Frame = +1
Query: 151 PAPSRHSRSPARLRSLPXYYLVCISTI--YPGLRRPIWRSSPMTPPSTTRVGRRRCFIDD 324
P P+R RSP++ +S S P RR +S PP+ R R
Sbjct: 314 PPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPA 373
Query: 325 FRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRC 504
R R P + +P K++ + K R SPS + PP P A+SR
Sbjct: 374 RRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPS--ASKSPPAPKRAKSRS 431
Query: 505 STSPYRGPRRS 537
+ P RRS
Sbjct: 432 KSPPAPRRRRS 442
Score = 27.9 bits (59), Expect = 9.3
Identities = 41/139 (29%), Positives = 54/139 (38%), Gaps = 5/139 (3%)
Frame = +1
Query: 133 SRGNAFPAPSRHSRSPARLRSLPXYYLVCIS-TIYPGLRRPIWRSSPMTPPSTTRVGRRR 309
SR + PAP+R RSP+ +S P S + P RR R SP S RRR
Sbjct: 336 SRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARR---RRSPSASKSPPAPRRRR 392
Query: 310 CFIDDFRP----RLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPP 477
P +PP AS +P +R S+ + PR R +
Sbjct: 393 SPSKSRSPAPKREIPPARRRRSPSASK-SPPAPKRAKSRSKSPPAPR---RRRSPSQSKS 448
Query: 478 PPPFAQSRCSTSPYRGPRR 534
P P + S SP + PRR
Sbjct: 449 PAPRRRRSPSKSP-QAPRR 466
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 438 LSIPLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 608
++ PLP+ P+ VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.00
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +3
Query: 63 TWECQTDSCSSYE-TTCRTVRSDIESRERVPGPVTSQP-------ESRKAPLSPRLLFSL 218
T TD S + T TV S IES E V P+ SQP E R+ P P+
Sbjct: 318 TRSAPTDDNGSLDLTNSLTVVSRIESAELVASPI-SQPTIVDTPSEQRRDPC-PKSSNMG 375
Query: 219 YINDIPRSPETHLALFADDTAIYYSCRKKAL 311
+I I L LF+ AIY+ C+ K++
Sbjct: 376 FIPLIIMGSLASLLLFSAGAAIYFGCKLKSM 406
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 352 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPR 531
+GS G+ST A SS T + +PS G+S P P P + S G
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 532 RSN-I*ASPSTVG 567
S+ +PST+G
Sbjct: 1295 TSHGSTQTPSTIG 1307
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 411 KRGRPPNTTLSIPLPTRRVNTPAPTVRPITMFDQPIPWAP 530
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 393 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPTVRPITMFDQPIPWAP 530
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 274 TPPSTTRVGRRRCFIDDFRPRLPPWDSGSGSGASTLTPR-KAQRCSSKGVALRTPR*ASP 450
TPP + + + R PP G+G+ T P + Q S +G A R P P
Sbjct: 198 TPPPPPTGEPQDLSAEGYASRRPP-PPPKGTGSPTPPPTGEPQDLSGEGNASRRP---PP 253
Query: 451 SRLGASIPPPPPFAQSRCSTSPYRGPRR 534
G PPPPP + + + RR
Sbjct: 254 PPKGTGSPPPPPTGEPQDLSGEGNASRR 281
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +1
Query: 328 RPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCS 507
RP PP +GS T P Q S +G A R P P G PPPPP + +
Sbjct: 126 RPPPPPKGTGSPPPPPTGEP---QDLSGEGNASRRP---PPPPKGTGSPPPPPTGEPQDL 179
Query: 508 TSPYRGPRR 534
++ RR
Sbjct: 180 STEGNASRR 188
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +1
Query: 328 RPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
RP PP +GS T P Q S++G A R P P G PPPPP
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP---QDLSTEGNASRRP---PPPPKGTGTPPPPP 203
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 334 RLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTS 513
R PP G+G+ T + +G A R P P G PPPPP + + +
Sbjct: 63 RPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRP---PPPPKGTGTPPPPPTGEPQDLSG 119
Query: 514 PYRGPRR 534
RR
Sbjct: 120 EGNASRR 126
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 453 PTRRVNTPAPTVRPITMFDQPIPW 524
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 393 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPTVRPITMFDQPIPWAP 530
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 24.6 bits (51), Expect(2) = 3.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 451 SRLGASIPPPPP 486
SR G S PPPPP
Sbjct: 131 SRAGGSSPPPPP 142
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 460 GASIPPPPPFAQSRCSTSPYRGP 528
G+S PPPPP R T P R P
Sbjct: 135 GSSPPPPPPPRVPR--TPPPRSP 155
>AF125955-11|AAK71367.1| 178|Caenorhabditis elegans Hypothetical
protein F46E10.11 protein.
Length = 178
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 24 QSLGTTV*YTNCITWECQTDSCSSYETTCRTVRSD---IESRERVPG-PVTSQPESRKAP 191
Q L T + C T C T +CS+ + C+ +RS+ I RVP T P + ++P
Sbjct: 49 QYLSLTPCNSGCSTCNCNTATCST-SSYCQQIRSNWRCINGCCRVPNYEPTLPPTTTRSP 107
Query: 192 LSP 200
++P
Sbjct: 108 VNP 110
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 447 PLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHI 587
PL + + T TV P+T QP P+ P + G+ + M H+
Sbjct: 653 PLMKQEIKTE--TVEPVTSIAQPFPFNPMMGNHGLNFANHMLLNKHL 697
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 447 PLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHI 587
PL + + T TV P+T QP P+ P + G+ + M H+
Sbjct: 675 PLMKQEIKTE--TVEPVTSIAQPFPFNPMMGNHGLNFANHMLLNKHL 719
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 447 PLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHI 587
PL + + T TV P+T QP P+ P + G+ + M H+
Sbjct: 675 PLMKQEIKTE--TVEPVTSIAQPFPFNPMMGNHGLNFANHMLLNKHL 719
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 25.4 bits (53), Expect(2) = 5.7
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 385 PRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFA 492
P K QR S+ + PR A P +SIPPPPP A
Sbjct: 518 PHKEQRRST---SKDPPRPAPPPV--SSIPPPPPIA 548
Score = 21.4 bits (43), Expect(2) = 5.7
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 472 PPPPPFAQSRCSTSP 516
PPPPP Q+ P
Sbjct: 563 PPPPPLPQNLSGAPP 577
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 469 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 344
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 YYLVCISTIYPGLR-RPIWRSSPMTPPSTTRVGRRRCFIDDFRPRLPPWDSGSG 363
YY+ +T+ + R +W+++ + G RR FID +P LPP ++ G
Sbjct: 102 YYIKAANTVKEKIPVRDLWKAAASSE------GTRRVFIDFKKPELPPTEAEDG 149
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = -3
Query: 226 LIYKLNSXRGESGALRDSGCDVTGPGTRSLDSISERTVRQVVSYDEHESVWHS 68
++Y +S G L+ + C +T T + R +R+ + YD ++W +
Sbjct: 778 MVYIHDSELKMHGNLKSTNCLITSRWTLQIADFGLRELREGIMYDSSYNIWEN 830
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +1
Query: 229 IYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCS 408
IYPGL P SPM + + LPP + A TL P+ + +
Sbjct: 245 IYPGLGPPALPLSPMPQGPPPNIPPSSIYSMPRANDLPPTEM-----APTL-PQISTSSN 298
Query: 409 SKGVALRTPR*ASPSRLGASIPPP-PPFAQSRCSTSPYRGP 528
++ +P SPS SIPPP PP +P R P
Sbjct: 299 GASPSV-SPASTSPSGPAPSIPPPRPPALAPPPPVAPRRNP 338
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +1
Query: 229 IYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCS 408
IYPGL P SPM + + LPP + A TL P+ + +
Sbjct: 245 IYPGLGPPALPLSPMPQGPPPNIPPSSIYSMPRANDLPPTEM-----APTL-PQISTSSN 298
Query: 409 SKGVALRTPR*ASPSRLGASIPPP-PPFAQSRCSTSPYRGP 528
++ +P SPS SIPPP PP +P R P
Sbjct: 299 GASPSV-SPASTSPSGPAPSIPPPRPPALAPPPPVAPRRNP 338
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 349 DSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
DS G+ L P+ + ++ +A+ + A PS L A IPPPPP
Sbjct: 756 DSAGAPGSPRLPPKPSV---AQTIAMHS---APPSPLTAPIPPPPP 795
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 349 DSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
DS G+ L P+ + ++ +A+ + A PS L A IPPPPP
Sbjct: 655 DSAGAPGSPRLPPKPSV---AQTIAMHS---APPSPLTAPIPPPPP 694
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 463 ASIPPPPPFAQSRCSTSPYRGP 528
A +PPPPP A C SP P
Sbjct: 87 APLPPPPPPASPCCGPSPVPAP 108
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 70 SARQTRAHHTRLLVEPFVPISSRGNAFPAPSRHSRSPARLRSLPXYYLVCISTIYPGLRR 249
S Q++ H+ + +V+ P+ S P PS +S +R+++LP +S G
Sbjct: 393 SRNQSQQHYQQHVVQAPPPVPSN----PPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSP 448
Query: 250 PIWRSSPMTPPSTTR 294
W P P+T R
Sbjct: 449 RQW--PPPAMPTTNR 461
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 70 SARQTRAHHTRLLVEPFVPISSRGNAFPAPSRHSRSPARLRSLPXYYLVCISTIYPGLRR 249
S Q++ H+ + +V+ P+ S P PS +S +R+++LP +S G
Sbjct: 393 SRNQSQQHYQQHVVQAPPPVPSN----PPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSP 448
Query: 250 PIWRSSPMTPPSTTR 294
W P P+T R
Sbjct: 449 RQW--PPPAMPTTNR 461
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +3
Query: 429 NTTLSIPLPTRRVNTPAPTVRPITMFDQP----IPWAPK 533
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 13 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 53
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 364 SGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 486
+G S TP + S + V +TPR ++P+ SI PPP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPP 176
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 447 PLPTRRVNTPAPTVRPITMFDQPIPWAPKVKYLG 548
PLP +N +P VRP+ F + P K LG
Sbjct: 42 PLPPPTINIESPPVRPLKAFISSAYYYPTSKSLG 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,688,691
Number of Sequences: 27780
Number of extensions: 517077
Number of successful extensions: 2175
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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