Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_P14
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 50 3e-06
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 50 3e-06
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 50 3e-06
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 48 7e-06
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 48 1e-05
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 48 1e-05
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 48 1e-05
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 47 2e-05
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 46 3e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 46 3e-05
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 45 6e-05
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 45 8e-05
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 45 8e-05
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 45 8e-05
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 44 2e-04
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 44 2e-04
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 44 2e-04
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 43 2e-04
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 43 2e-04
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 43 2e-04
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 43 2e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 43 3e-04
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 42 6e-04
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 42 6e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 42 6e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 41 0.001
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 41 0.001
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 41 0.001
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 41 0.001
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 41 0.001
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 40 0.002
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 40 0.002
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 40 0.002
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 40 0.002
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 40 0.002
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 40 0.002
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 40 0.002
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 40 0.002
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 40 0.003
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 39 0.004
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 39 0.004
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 39 0.004
AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A recept... 39 0.005
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 38 0.009
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.009
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.009
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.021
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 37 0.021
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 37 0.021
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 36 0.028
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.050
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.050
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.050
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.065
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 35 0.087
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 34 0.11
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 34 0.11
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 34 0.15
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 33 0.20
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 33 0.20
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.26
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.26
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 32 0.46
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 32 0.46
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.61
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 31 0.81
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 31 0.81
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 0.81
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 31 1.1
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 31 1.1
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 30 1.9
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 30 2.5
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 28 7.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 447
L+M W DK+L+WN +WG ++ + S+++W PD+VL NA A++ ++G
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGR 140
Query: 448 VSW 456
V W
Sbjct: 141 VVW 143
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 405
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 406 GDYALRARVSNNGSVSWI 459
+ V ++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNG 444
L +NW+D RLSWN W + R+W+PD++L+N A A + V+++G
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDG 224
Query: 445 SVSWI 459
+V+W+
Sbjct: 225 NVTWL 229
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTA 405
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 406 GDYALRARVSNNGSVSWI 459
+ V ++G V+W+
Sbjct: 159 VSFKSNVFVDHHGDVTWV 176
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTA 405
++ E + + + L +W+D RLSWN E+G T + E LW PD++L NA +
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 406 GDYALRARVSNNGSVSW 456
+ VS G V+W
Sbjct: 104 VSETTQVHVSFEGRVTW 120
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 175 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVS 348
S P+ + + L L L ++ E + + L+ WID++LSW+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 349 SERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 456
E +W PD+VL N A + + +A + G V+W
Sbjct: 105 YEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 175 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVS 348
S P+ + + L L L ++ E + + L+ WID++LSW+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 349 SERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 456
E +W PD+VL N A + + +A + G V+W
Sbjct: 105 YEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 175 SLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVS 348
S P+ + + L L L ++ E + + L+ WID++LSW+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 349 SERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 456
E +W PD+VL N A + + +A + G V+W
Sbjct: 105 YEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 450
+++W PD+++ N A A+R AR+ NG++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 450
+++W PD+++ N A A+R AR+ NG++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 450
+++W PD+++ N A A+R AR+ NG++
Sbjct: 142 DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 196 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 369
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 370 DVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
DVVL N A G+Y + +A+++ NG+V W
Sbjct: 112 DVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 196 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 369
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 370 DVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
DVVL N A G+Y + +A+++ NG+V W
Sbjct: 112 DVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 190 SKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRP 369
+K+V ++ + + I E V++ ++W D +SW+ +WG S ++W P
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTP 142
Query: 370 DVVLLNAAATT-AGDYALRARVSN-NGSVSWIKRLDIXTPISMQLDNW 507
++V +N +T+ G + +N G + TP Q +++
Sbjct: 143 NIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRFQYEDY 190
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 196 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 369
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 370 DVVLLNAAATTAGD-YALRARVSNNGSVSWI 459
DV++ N+A YA V NG V+W+
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNWM 141
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 114 RVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 114 RVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP KI + L L + N+ E E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
V+ E++W PD+VL NA + + + G+V W+
Sbjct: 114 RVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWV 154
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 358 LWRPDVVLLNAAATTAGD--YALRARVSNNGSV 450
+W P+ +++ + D Y A + +NGS+
Sbjct: 138 VWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSI 170
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLN 387
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 199 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 366
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 367 PDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDIXTPISM 492
PD + N T ++ R R V + K +D+ P+S+
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMSV 163
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 199 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 366
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 367 PDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDIXTPISM 492
PD + N T ++ R R V + K +D+ P+S+
Sbjct: 120 PDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMSV 163
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLN 387
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSS 351
PP + V L L H I E + T+ +L + +W+D L+W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 352 ERLWRPDVVLLN 387
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 187 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 358 LWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 459
+W+PDV+L N+ T Y V + G V W+
Sbjct: 104 IWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWV 138
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 187 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 358 LWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 459
+W+PDV+L N+ T Y V + G V W+
Sbjct: 104 IWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWV 138
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 187 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 358 LWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 459
+W+PDV+L N+ T Y V + G V W+
Sbjct: 104 IWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWV 138
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 187 HSK-IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 358 LWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWI 459
+W+PDV+L N+ T Y V + G V W+
Sbjct: 104 IWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWV 138
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +1
Query: 202 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 378
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 379 LLNAAATTAGDY---ALRARVSNNGSVSWIKRLDIXTPISMQLDNW 507
L N+A + A+ A V + G V NW
Sbjct: 114 LYNSARGNSWHLYMGAMPATVYSTGKVWSTGTFSFYVTCQFDFTNW 159
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 405
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 406 GDYALRARVSNNGSVSWIKRL--DIXTPISMQ 495
+ A V N G V + + DI +++Q
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDISCNLNLQ 160
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTA-- 405
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 406 GDYALRARVSNNGSVSWIKRL--DIXTPISMQ 495
+ A V N G V + + DI +++Q
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDISCNLNLQ 160
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +1
Query: 187 HSKIV-VNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 357
H K V V L L L+ ++ E + ++ Q W D +L W+ E+G T L +
Sbjct: 46 HRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLRWSPEEYGNITTLQIPHGT 105
Query: 358 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 450
LW+PD++L N+A + + VS+NG V
Sbjct: 106 LWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 393
L+M W D RL W+ G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCS-TWLVSS 351
PP ++ ++ + L H I E +++L + W D LSW E+ G TWL
Sbjct: 86 PPDGRVDISHNIELVHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PE 144
Query: 352 ERLWRPDVVLLNAAATTAGDYALRA--RVSNNGSVSW 456
+W PD+++ N A+R+ +VS G V++
Sbjct: 145 HSIWIPDIIVFNTLEHKMLLEAVRSPIKVSYTGEVTY 181
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 41.9 bits (94), Expect = 6e-04
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 217 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 375
+L+ ++E + + ++ ++ W D RLSWNA W +T + + +++W P +
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIYMKQDKVWSPTI 133
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 181 PPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 357
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 358 LWRPDVVLLNA 390
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Frame = +1
Query: 202 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 378
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 379 LLNAAATTAGDY---ALRARVSNNGSVSWIKRLDIXTPISMQLDNW 507
L N+A + L A V N G V NW
Sbjct: 114 LYNSARGNSWSLYLTGLPAIVYNTGKVWSRGTFSFFVTCQFDFTNW 159
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
VS +++W PD+VL NA + +++ G + W+
Sbjct: 106 RVSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 220 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 396
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 397 TTAGDYALR-ARVSNNGSVSW 456
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
VS +++W PD+VL NA + +++ G + W+
Sbjct: 106 RVSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 163 RTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 342
R LP K+ + L L + N+ E + + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 343 -VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 459
VS +++W PD+VL NA + +++ G + W+
Sbjct: 106 RVSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWV 146
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 220 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAA 396
+R ++ E + L+M W D +L+W ++G T + S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 397 TTAGDYALR-ARVSNNGSVSW 456
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +1
Query: 202 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV---SSERLWRP 369
V + L L+ ++ E V + A L W D +L W ++G + SS+ +W+P
Sbjct: 53 VKIKLFLQQILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKP 112
Query: 370 DVVLLNAAATT-AGDYALRARVSNNGSVSWI 459
DV+L N+AA + + G+V WI
Sbjct: 113 DVLLYNSAAEDFDSTFKSNLLTYHTGTVVWI 143
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +1
Query: 196 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 363
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 364 RPDVVLLNAA-ATTAGDYALRARVSNNGSV 450
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/94 (19%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD 411
+ E++ + + ++ W D+ L+WN ++G + V SE +W+PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 412 YALR--ARVSNNGSVSWIKRLDIXTPISMQLDNW 507
++ ++ + G +S + + +Q++ +
Sbjct: 124 NEMQTNVQIEHTGKISLFRAIITDITCDLQMEKF 157
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/94 (19%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD 411
+ E++ + + ++ W D+ L+WN ++G + V SE +W+PD+++ N A +
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 123
Query: 412 YALR--ARVSNNGSVSWIKRLDIXTPISMQLDNW 507
++ ++ + G +S + + +Q++ +
Sbjct: 124 NEMQTNVQIEHTGKISLFRAIITDITCDLQMEKF 157
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 199 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 375
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 376 VLLNAAA--TTAGDYALRARV 432
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 199 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 375
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 376 VLLNAAA--TTAGDYALRARV 432
+ N+A+ +A D++ A V
Sbjct: 134 KVSNSASGLGSAFDFSTSAHV 154
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/94 (19%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD 411
+ E++ + + ++ W D+ L+WN ++G + V SE +W+PD+++ N A +
Sbjct: 48 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKE 107
Query: 412 YALR--ARVSNNGSVSWIKRLDIXTPISMQLDNW 507
++ ++ + G +S + + +Q++ +
Sbjct: 108 NEMQTNVQIEHTGKISLFRAIITDITCDLQMEKF 141
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 151 RSSQRTIGSLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 327
R + T+ S P +VV+L + L+ N+ E E + + A L+ W D+ L W +
Sbjct: 35 REERPTLDSSKP---VVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLRWEPTAYE 91
Query: 328 CSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 459
T L + LW PD++L N+ + Y + + G+++W+
Sbjct: 92 NVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINWM 137
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 369
L +L+ ++E E V ++ +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNAA 393
++ E + ILA + +W D +L+W+ +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 394 ATT-AGDYALRARVSNNGSV 450
+ + Y+ R VS+NG V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 187 HSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSE 354
HSK +N+T I + + +IL ++++W+D +L W+ + T + + S+
Sbjct: 20 HSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSD 79
Query: 355 RLWRPDVVLLNAA 393
++W+PD++L N A
Sbjct: 80 KIWKPDIILYNNA 92
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 235 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTA 405
+ E +++L +W D L W+ EW G + +W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEETDTL 127
Query: 406 GDYALRARVSNNGSVSWIKRLDIXTPISM 492
++ +R + V + K +D+ P+S+
Sbjct: 128 DNHNVRVHYNGKVEVDFNKLIDLICPMSV 156
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 448 VSWI 459
V+WI
Sbjct: 137 VTWI 140
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 217 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLWRP 369
+L+ + E E V ++ +L W D RLSWNA ++ T + + E++W P
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIFTRQEKIWSP 132
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 256 VRILADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNAAATT-AGDYALR 423
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+A+ +
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 424 ARVSNNGSVSWI 459
V N G V+WI
Sbjct: 72 EVVYNTGEVNWI 83
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
L+M+W D L+W+ E+G + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 448 VSWI 459
V+WI
Sbjct: 137 VTWI 140
>AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A receptor
subunit protein.
Length = 550
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS---SERLWRPDVVLLNAAATT 402
+I E + + L W D+RL W + E +S S+ +W PD L N +
Sbjct: 91 SISEVDMDYTLTMYLHQYWTDERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSY 149
Query: 403 AGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRXLGCTTSD 567
+ R R++ +G V++ RL SM L N++ + V++ G TTS+
Sbjct: 150 LHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFSLDSQNCTVEIESYGYTTSE 207
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 37.9 bits (84), Expect = 0.009
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS---SERLWRPDVVLLNAAATT 402
+I E + + L W D+RL W + E +S S+ +W PD L N +
Sbjct: 91 SISEVDMDYTLTMYLHQYWTDERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSY 149
Query: 403 AGDYALR---ARVSNNGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRXLGCTTSD 567
+ R R++ +G V++ RL SM L N+ + V++ G TTS+
Sbjct: 150 LHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSE 207
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 375
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 375
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 369
L +L+ ++E V ++ +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 169 IGSLPPH----SKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCS 333
I S+PP+ + +N L+H + E + I L+++W D RL WN W +
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKN 106
Query: 334 TWLVSS-ERLWRP 369
+V S +W P
Sbjct: 107 KLVVHSFHHIWVP 119
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.021
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NAAATTA 405
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL NA
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNADGNYL 124
Query: 406 GDYALRARVSNNGSVSWI 459
+ V + G + W+
Sbjct: 125 VSFYSNVVVEHTGDMLWV 142
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.021
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NAAATTA 405
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL NA
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNADGNYL 124
Query: 406 GDYALRARVSNNGSVSWI 459
+ V + G + W+
Sbjct: 125 VSFYSNVVVEHTGDMLWV 142
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 ESESTVRILADLQMNWIDKRLSWNAGEWGCST-WL-VSSERLWRPDVVLLNAA-ATTAGD 411
+++ T++ + + W D L WN W+ +S+ R W PDV+ N D
Sbjct: 67 QTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTNGIDMDPLLD 126
Query: 412 YALR-ARVSNNGSVSWIKRLDIXTPISMQLDNW 507
++ A + NG + + + +P +++DN+
Sbjct: 127 KDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 196 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LWRP 369
+++N++++ + +E T+ ++ + W D+ L WN ++ TWL E LW P
Sbjct: 53 LIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 370 DVVLLNAAAT 399
D + + T
Sbjct: 112 DTTVSTSIDT 121
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 369
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 370 DVVLLNA 390
D L N+
Sbjct: 138 DTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 369
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 370 DVVLLNA 390
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 369
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 370 DVVLLNA 390
D L N+
Sbjct: 138 DTYLYNS 144
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.065
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 214 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 366
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.087
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 196 IVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LWRP 369
+ +N++++ + + +E T+ + + W D+ L WN ++ TWL E LW P
Sbjct: 53 LFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 370 DVVLLNAAAT 399
D + + T
Sbjct: 112 DTTVSTSIDT 121
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDYALRARVSN 438
L+ +WIDKRLS+ G +++ + ++W PD N A T + R+ N
Sbjct: 116 LRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHN 175
Query: 439 NGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRXLGCTTSD 567
+G+V + R+ + M L + + + TT D
Sbjct: 176 DGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKD 218
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN---AAATTAGDYALRARVSN 438
L+ +WIDKRLS+ G +++ + ++W PD N A T + R+ N
Sbjct: 116 LRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHN 175
Query: 439 NGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRXLGCTTSD 567
+G+V + R+ + M L + + + TT D
Sbjct: 176 DGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKD 218
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 202 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 375
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 376 VLLNA 390
L N+
Sbjct: 193 YLYNS 197
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +1
Query: 184 PHSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 354
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 355 RLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWI 459
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +1
Query: 184 PHSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 354
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 355 RLWRPDVVLLNAAATTAGD-----YALRARVSNNGSVSWI 459
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 190 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 363
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 364 RPDVVLLNA 390
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 190 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 363
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 364 RPDVVLLNA 390
PD L N+
Sbjct: 110 LPDTTLYNS 118
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 220 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 390
L+ + E V ++ ++ W D RLSWNA + T+ +W P + A
Sbjct: 81 LKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFYTRQSNVWSPTLSAFGA 138
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 32.3 bits (70), Expect = 0.46
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Frame = +1
Query: 178 LPPHSKIVVNLTLHLRHANIRESESTVRILADLQMN--WIDKRLSWNAGEWGCSTWLVS- 348
+P ++ + V++ L ++ + SE + +AD+ + W D RL + + L S
Sbjct: 52 VPSNNSVQVSVELTVQDIS-SISEISSSFIADVWFSQVWYDPRLEYRNISCKTNLSLDSY 110
Query: 349 -SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDIXTPISMQLDNWAQ 513
SERLW P+V +N+ +T + + NG+V W+ R+ + P S +L +
Sbjct: 111 VSERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTV-WLNYRVQVSAPCSFELSRFPI 169
Query: 514 RHADLHV 534
+ H+
Sbjct: 170 DAQECHL 176
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 217 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 381
+L+ + E E V ++ ++ W D R++W++ +G L + +++W P + L
Sbjct: 80 YLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLHMRQDKVWSPTLSL 135
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +1
Query: 157 SQRTIGSLPPHSK---IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN-AGEW 324
S ++ + PP+S I + L ++ S + D+ +NW D+R+ W+ GE+
Sbjct: 54 SVHSLSAYPPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEF 113
Query: 325 GC--STWLVSSERLWRPDVV 378
++ +S +W P V+
Sbjct: 114 ENYEHLYIFNSSAIWTPHVI 133
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 31.5 bits (68), Expect = 0.81
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 169 IGSLPPHSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV 345
I S+ S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++
Sbjct: 40 IPSMGKKSPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIM 99
Query: 346 SSER-LWRPDVVLLNA 390
+W PD L N+
Sbjct: 100 LPHHFIWLPDTTLYNS 115
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 196 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERL-WRP 369
++V++T+ L +RE++ + W D +L+WN + T +V L W P
Sbjct: 66 VIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLAWNPADHSGLTQVVMPRSLVWVP 125
Query: 370 DVVLLNAAAT 399
+ + N+ T
Sbjct: 126 KLFIYNSMDT 135
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYA---LRARVSNNG 444
L M W D+RL+ N T + ++R+W PD+ +N+ + L V +G
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDG 234
Query: 445 SVSWIKRLDIXTPISMQL 498
+ RLD+ M L
Sbjct: 235 LIFKTMRLDVTLSCMMDL 252
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +1
Query: 199 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDV 375
VV L +++ ++ R ++ Q W D RL+ N ++W+PDV
Sbjct: 57 VVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDV 116
Query: 376 VLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRX 546
NA + + +GS+ + R+ + ++ L+ W H+++
Sbjct: 117 YFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQRCHLRILS 176
Query: 547 LGCTT 561
TT
Sbjct: 177 YAYTT 181
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +1
Query: 199 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDV 375
VV L +++ ++ R ++ Q W D RL+ N ++W+PDV
Sbjct: 57 VVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDV 116
Query: 376 VLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDIXTPISMQLDNWAQRHADLHVQVRX 546
NA + + +GS+ + R+ + ++ L+ W H+++
Sbjct: 117 YFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQRCHLRILS 176
Query: 547 LGCTT 561
TT
Sbjct: 177 YAYTT 181
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 196 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 369
++VN+T+ L ++E++ + W D RLSW+ ++ G +V +W P
Sbjct: 93 VLVNMTIVLGILIELKENQQLAAYVISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIP 152
Query: 370 DVVLLNA 390
+ + N+
Sbjct: 153 KLFVYNS 159
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 190 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 363
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 364 RPDVVLLNA 390
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 190 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 363
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 364 RPDVVLLNA 390
PD L N+
Sbjct: 65 LPDTTLYNS 73
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 241 ESESTVRILADLQMNWIDKRLSWNAGEWGCS-TWL-VSSERLWRPDVV 378
+++ T+ + + W D L WN + + W+ +S R+W PDV+
Sbjct: 67 QTQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Frame = +1
Query: 172 GSLPPHSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCST---- 336
GS+P + + L L H + + E + + ++ W D+RL W+ + T
Sbjct: 47 GSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHYSGFTRTRL 106
Query: 337 -----WLVSSERLWRPDVVLLN 387
WL ++W+P + + N
Sbjct: 107 EFVDFWLY---QIWKPRIYMTN 125
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 369
L L+ + E + V ++ ++ W D RL+WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 391 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 233
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 116 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 169
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 391 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 233
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 280 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 333
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 391 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 233
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 200 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 253
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -3
Query: 469 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSP 323
P A RRRS G RSPRR P A R+ S R+P + SP
Sbjct: 461 PQAPRRRRSP---SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,305
Number of Sequences: 27780
Number of extensions: 321034
Number of successful extensions: 1153
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -